Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBA1AQ71U36 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 SRD5A1P1-201ENST00000442297 786 ntBASIC19.68■□□□□ 0.74
TUBA1AQ71U36 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBA1AQ71U36 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBA1AQ71U36 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 C17orf82-201ENST00000623772 1530 ntBASIC19.66■□□□□ 0.74
TUBA1AQ71U36 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 AF106564.1-201ENST00000607058 2553 ntBASIC19.66■□□□□ 0.74
TUBA1AQ71U36 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TUBA1AQ71U36 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 AC087742.1-201ENST00000575880 1738 ntBASIC19.65■□□□□ 0.74
TUBA1AQ71U36 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TUBA1AQ71U36 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 AC099791.2-201ENST00000605725 427 ntBASIC19.64■□□□□ 0.73
TUBA1AQ71U36 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 AC244015.2-201ENST00000616358 1861 ntBASIC19.64■□□□□ 0.73
TUBA1AQ71U36 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1AQ71U36 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms