Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST2H3AQ71DI3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HIST2H3AQ71DI3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST2H3AQ71DI3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 PBX2P1-201ENST00000493219 1291 ntBASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 AC110285.6-201ENST00000617652 491 ntBASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST2H3AQ71DI3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 EDA-201ENST00000338901 1233 ntBASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 AL034346.1-201ENST00000568244 1277 ntBASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST2H3AQ71DI3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 IGHV3-19-201ENST00000521488 291 ntBASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST2H3AQ71DI3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms