Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 MIR6084-201ENST00000622012 110 ntBASIC20.05■□□□□ 0.8
RTL4Q6ZR62 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RTL4Q6ZR62 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 AC087623.3-201ENST00000607047 1098 ntBASIC20.04■□□□□ 0.8
RTL4Q6ZR62 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL4Q6ZR62 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RTL4Q6ZR62 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 AC123595.1-201ENST00000440769 1046 ntBASIC20.02■□□□□ 0.8
RTL4Q6ZR62 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTL4Q6ZR62 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL4Q6ZR62 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.02■□□□□ 0.79
RTL4Q6ZR62 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL4Q6ZR62 OXCT2P1-201ENST00000447263 1535 ntBASIC20.02■□□□□ 0.79
RTL4Q6ZR62 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RTL4Q6ZR62 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL4Q6ZR62 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTL4Q6ZR62 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20■□□□□ 0.79
RTL4Q6ZR62 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL4Q6ZR62 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms