Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 MIR939-201ENST00000401314 82 ntBASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 AC008764.7-201ENST00000593779 1081 ntBASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC1Q6VVB1 OR7E47P-201ENST00000546390 1422 ntBASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 AC099791.1-201ENST00000416440 715 ntBASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC1Q6VVB1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 IGHV3-19-201ENST00000521488 291 ntBASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NHLRC1Q6VVB1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 RASA4CP-201ENST00000424092 1398 ntBASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 AC027682.1-201ENST00000562846 899 ntBASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 AF213884.3-201ENST00000563833 479 ntBASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC1Q6VVB1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 SMUG1P1-201ENST00000590640 811 ntBASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NHLRC1Q6VVB1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NHLRC1Q6VVB1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms