Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 OR7E47P-201ENST00000546390 1422 ntBASIC21.84■■□□□ 1.09
CASC4Q6P4E1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.84■■□□□ 1.09
CASC4Q6P4E1 OR2I1P-207ENST00000453522 948 ntBASIC21.84■■□□□ 1.09
CASC4Q6P4E1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 AC087239.1-201ENST00000622671 572 ntBASIC21.84■■□□□ 1.09
CASC4Q6P4E1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CASC4Q6P4E1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 SYT6-210ENST00000641643 1587 ntBASIC21.83■■□□□ 1.09
CASC4Q6P4E1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CASC4Q6P4E1 AC068587.7-201ENST00000641602 218 ntBASIC21.83■■□□□ 1.09
CASC4Q6P4E1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CASC4Q6P4E1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CASC4Q6P4E1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 AC026310.3-201ENST00000625186 2373 ntBASIC21.82■■□□□ 1.08
CASC4Q6P4E1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 MIR4466-201ENST00000606121 54 ntBASIC21.82■■□□□ 1.08
CASC4Q6P4E1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.82■■□□□ 1.08
CASC4Q6P4E1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CASC4Q6P4E1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 SERBP1P1-201ENST00000396021 1160 ntBASIC21.8■■□□□ 1.08
CASC4Q6P4E1 AC010525.1-201ENST00000585559 441 ntBASIC21.8■■□□□ 1.08
CASC4Q6P4E1 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.8■■□□□ 1.08
CASC4Q6P4E1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASC4Q6P4E1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 DUX4L19-201ENST00000557448 1267 ntBASIC21.79■■□□□ 1.08
CASC4Q6P4E1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 AC244015.2-201ENST00000616358 1861 ntBASIC21.79■■□□□ 1.08
CASC4Q6P4E1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CASC4Q6P4E1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CASC4Q6P4E1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms