Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 DUX4L19-201ENST00000557448 1267 ntBASIC19.59■□□□□ 0.73
ZNF544Q6NX49 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNF544Q6NX49 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF544Q6NX49 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.58■□□□□ 0.73
ZNF544Q6NX49 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF544Q6NX49 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF544Q6NX49 AC005837.3-201ENST00000612163 286 ntBASIC19.58■□□□□ 0.72
ZNF544Q6NX49 AC106739.1-201ENST00000617035 715 ntBASIC19.58■□□□□ 0.72
ZNF544Q6NX49 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ZNF544Q6NX49 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF544Q6NX49 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF544Q6NX49 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 AL353803.4-201ENST00000565882 1934 ntBASIC19.57■□□□□ 0.72
ZNF544Q6NX49 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF544Q6NX49 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 FBXW4P1-201ENST00000426721 2239 ntBASIC19.56■□□□□ 0.72
ZNF544Q6NX49 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 UNC93B3-201ENST00000308076 687 ntBASIC19.56■□□□□ 0.72
ZNF544Q6NX49 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 PBX2P1-201ENST00000493219 1291 ntBASIC19.56■□□□□ 0.72
ZNF544Q6NX49 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF544Q6NX49 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF544Q6NX49 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 C11orf96-202ENST00000528572 1834 ntBASIC19.54■□□□□ 0.72
ZNF544Q6NX49 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 AL136162.1-201ENST00000607711 1078 ntBASIC19.54■□□□□ 0.72
ZNF544Q6NX49 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF544Q6NX49 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 AC135279.3-201ENST00000610945 1311 ntBASIC19.53■□□□□ 0.72
ZNF544Q6NX49 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF544Q6NX49 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms