Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R4Q6NUP7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 LINC01521-201ENST00000504184 1943 ntBASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R4Q6NUP7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R4Q6NUP7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 MIR3621-201ENST00000580529 85 ntBASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 AL157384.1-201ENST00000445995 2473 ntBASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R4Q6NUP7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R4Q6NUP7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 AL136116.3-201ENST00000402907 1138 ntBASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 AC131281.2-201ENST00000520478 145 ntBASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms