Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 MIR3181-201ENST00000578512 73 ntBASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ATPAF1Q5TC12 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 pRNA.6-201ENST00000610482 90 ntBASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 pRNA.5-201ENST00000612139 90 ntBASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 pRNA.11-201ENST00000618423 90 ntBASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 pRNA.13-201ENST00000619112 90 ntBASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.53■□□□□ 0.56
ATPAF1Q5TC12 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 SERBP1P1-201ENST00000396021 1160 ntBASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 AC011298.3-201ENST00000615796 283 ntBASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATPAF1Q5TC12 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATPAF1Q5TC12 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ATPAF1Q5TC12 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
ATPAF1Q5TC12 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATPAF1Q5TC12 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATPAF1Q5TC12 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 UNC93B3-201ENST00000308076 687 ntBASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.5■□□□□ 0.55
ATPAF1Q5TC12 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 AC133637.1-201ENST00000624115 1537 ntBASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms