Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RUNDC3AQ59EK9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RUNDC3AQ59EK9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RUNDC3AQ59EK9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 AC068587.7-201ENST00000641602 218 ntBASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RUNDC3AQ59EK9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RUNDC3AQ59EK9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RUNDC3AQ59EK9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 AC099791.2-201ENST00000605725 427 ntBASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 SLC25A24-204ENST00000569674 2357 ntBASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RUNDC3AQ59EK9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RUNDC3AQ59EK9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms