Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L13-201ENST00000554103 1267 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L15-201ENST00000611059 1267 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L23-201ENST00000615195 1269 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L24-201ENST00000617576 1269 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L22-201ENST00000618238 1269 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L20-201ENST00000619712 1269 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L21-201ENST00000622058 1269 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L10-201ENST00000622460 1267 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 DUX4L25-201ENST00000624915 1269 ntBASIC10.74□□□□□ -0.69
LINC01554Q52M75 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
LINC01554Q52M75 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01554Q52M75 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC01554Q52M75 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01554Q52M75 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01554Q52M75 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01554Q52M75 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01554Q52M75 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 AC112907.3-201ENST00000577781 2400 ntBASIC10.73□□□□□ -0.69
LINC01554Q52M75 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01554Q52M75 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01554Q52M75 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 HES6-205ENST00000409356 528 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 RPS2P35-201ENST00000443417 897 ntBASIC10.72□□□□□ -0.69
LINC01554Q52M75 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 DUX4L11-201ENST00000611504 1267 ntBASIC10.72□□□□□ -0.69
LINC01554Q52M75 DUX4L12-201ENST00000614593 1267 ntBASIC10.72□□□□□ -0.69
LINC01554Q52M75 DUX4L14-201ENST00000621227 1267 ntBASIC10.72□□□□□ -0.69
LINC01554Q52M75 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC01554Q52M75 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01554Q52M75 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01554Q52M75 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms