Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 AC021242.3-201ENST00000607598 1377 ntBASIC19.11■□□□□ 0.65
CCDC58Q4VC31 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC58Q4VC31 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC58Q4VC31 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC58Q4VC31 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC58Q4VC31 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC58Q4VC31 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 Z98882.1-201ENST00000622160 2253 ntBASIC19.08■□□□□ 0.64
CCDC58Q4VC31 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CCDC58Q4VC31 AC009102.2-201ENST00000606772 1639 ntBASIC19.07■□□□□ 0.64
CCDC58Q4VC31 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC58Q4VC31 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 AL031848.2-201ENST00000607670 837 ntBASIC19.06■□□□□ 0.64
CCDC58Q4VC31 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC58Q4VC31 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC58Q4VC31 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms