Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPCS3P61009 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SPCS3P61009 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.39■□□□□ 0.37
SPCS3P61009 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.39■□□□□ 0.37
SPCS3P61009 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.39■□□□□ 0.37
SPCS3P61009 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPCS3P61009 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPCS3P61009 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPCS3P61009 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS3P61009 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.38■□□□□ 0.37
SPCS3P61009 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS3P61009 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SPCS3P61009 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.38■□□□□ 0.37
SPCS3P61009 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.38■□□□□ 0.37
SPCS3P61009 Z92544.1-202ENST00000571933 1220 ntBASIC17.38■□□□□ 0.37
SPCS3P61009 AL499627.2-201ENST00000606283 725 ntBASIC17.38■□□□□ 0.37
SPCS3P61009 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS3P61009 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS3P61009 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS3P61009 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS3P61009 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SPCS3P61009 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS3P61009 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SPCS3P61009 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SPCS3P61009 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SPCS3P61009 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.37■□□□□ 0.37
SPCS3P61009 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SPCS3P61009 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.37■□□□□ 0.37
SPCS3P61009 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.37■□□□□ 0.37
SPCS3P61009 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS3P61009 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.36■□□□□ 0.37
SPCS3P61009 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SPCS3P61009 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SPCS3P61009 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SPCS3P61009 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.36■□□□□ 0.37
SPCS3P61009 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.36■□□□□ 0.37
SPCS3P61009 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SPCS3P61009 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS3P61009 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SPCS3P61009 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SPCS3P61009 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.35■□□□□ 0.37
SPCS3P61009 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPCS3P61009 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.35■□□□□ 0.37
SPCS3P61009 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SPCS3P61009 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.35■□□□□ 0.37
SPCS3P61009 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SPCS3P61009 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPCS3P61009 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.35■□□□□ 0.37
SPCS3P61009 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS3P61009 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.35■□□□□ 0.37
SPCS3P61009 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.34■□□□□ 0.37
SPCS3P61009 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SPCS3P61009 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.34■□□□□ 0.37
SPCS3P61009 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.34■□□□□ 0.37
SPCS3P61009 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS3P61009 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPCS3P61009 AC005229.4-201ENST00000610085 2198 ntBASIC17.33■□□□□ 0.37
SPCS3P61009 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPCS3P61009 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.33■□□□□ 0.37
SPCS3P61009 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPCS3P61009 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SPCS3P61009 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPCS3P61009 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPCS3P61009 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms