Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN8P56748 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 SERBP1P1-201ENST00000396021 1160 ntBASIC20.42■□□□□ 0.86
CLDN8P56748 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN8P56748 DUX4L19-201ENST00000557448 1267 ntBASIC20.42■□□□□ 0.86
CLDN8P56748 FEM1AP4-201ENST00000443167 1987 ntBASIC20.42■□□□□ 0.86
CLDN8P56748 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CLDN8P56748 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CLDN8P56748 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN8P56748 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN8P56748 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.41■□□□□ 0.86
CLDN8P56748 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 AL356441.2-201ENST00000443009 864 ntBASIC20.41■□□□□ 0.86
CLDN8P56748 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
CLDN8P56748 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN8P56748 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 SYT6-210ENST00000641643 1587 ntBASIC20.41■□□□□ 0.86
CLDN8P56748 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN8P56748 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CLDN8P56748 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.41■□□□□ 0.86
CLDN8P56748 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN8P56748 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN8P56748 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN8P56748 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN8P56748 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN8P56748 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN8P56748 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN8P56748 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN8P56748 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.4■□□□□ 0.86
CLDN8P56748 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN8P56748 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN8P56748 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN8P56748 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN8P56748 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN8P56748 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN8P56748 MIR4466-201ENST00000606121 54 ntBASIC20.39■□□□□ 0.85
CLDN8P56748 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN8P56748 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN8P56748 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN8P56748 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN8P56748 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN8P56748 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN8P56748 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CLDN8P56748 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN8P56748 AP005435.1-201ENST00000529293 1178 ntBASIC20.38■□□□□ 0.85
CLDN8P56748 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN8P56748 AL034346.1-201ENST00000568244 1277 ntBASIC20.38■□□□□ 0.85
CLDN8P56748 AC136469.2-201ENST00000623944 1028 ntBASIC20.38■□□□□ 0.85
CLDN8P56748 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN8P56748 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN8P56748 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN8P56748 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CLDN8P56748 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN8P56748 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN8P56748 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CLDN8P56748 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN8P56748 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN8P56748 AC011298.3-201ENST00000615796 283 ntBASIC20.37■□□□□ 0.85
CLDN8P56748 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CLDN8P56748 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN8P56748 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN8P56748 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CLDN8P56748 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN8P56748 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN8P56748 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN8P56748 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CLDN8P56748 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN8P56748 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN8P56748 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms