Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH12P55289 AC099791.2-201ENST00000605725 427 ntBASIC19.95■□□□□ 0.78
CDH12P55289 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH12P55289 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.95■□□□□ 0.78
CDH12P55289 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDH12P55289 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH12P55289 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH12P55289 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDH12P55289 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CDH12P55289 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.94■□□□□ 0.78
CDH12P55289 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH12P55289 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH12P55289 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDH12P55289 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH12P55289 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH12P55289 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH12P55289 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH12P55289 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH12P55289 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH12P55289 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH12P55289 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH12P55289 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH12P55289 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CDH12P55289 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CDH12P55289 pRNA.6-201ENST00000610482 90 ntBASIC19.93■□□□□ 0.78
CDH12P55289 pRNA.5-201ENST00000612139 90 ntBASIC19.93■□□□□ 0.78
CDH12P55289 pRNA.11-201ENST00000618423 90 ntBASIC19.93■□□□□ 0.78
CDH12P55289 pRNA.13-201ENST00000619112 90 ntBASIC19.93■□□□□ 0.78
CDH12P55289 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDH12P55289 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH12P55289 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH12P55289 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH12P55289 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH12P55289 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH12P55289 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH12P55289 AC133637.1-201ENST00000624115 1537 ntBASIC19.92■□□□□ 0.78
CDH12P55289 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDH12P55289 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDH12P55289 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH12P55289 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDH12P55289 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH12P55289 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH12P55289 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
CDH12P55289 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH12P55289 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH12P55289 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH12P55289 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 AF106564.1-201ENST00000607058 2553 ntBASIC19.91■□□□□ 0.78
CDH12P55289 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH12P55289 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH12P55289 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH12P55289 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH12P55289 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CDH12P55289 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH12P55289 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH12P55289 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDH12P55289 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDH12P55289 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH12P55289 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH12P55289 SLC25A24-204ENST00000569674 2357 ntBASIC19.9■□□□□ 0.78
CDH12P55289 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDH12P55289 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CDH12P55289 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH12P55289 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms