Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH4P55283 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.02■■□□□ 1.12
CDH4P55283 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.02■■□□□ 1.12
CDH4P55283 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.02■■□□□ 1.12
CDH4P55283 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.02■■□□□ 1.12
CDH4P55283 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.02■■□□□ 1.12
CDH4P55283 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.02■■□□□ 1.12
CDH4P55283 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH4P55283 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH4P55283 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH4P55283 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.01■■□□□ 1.11
CDH4P55283 AP006587.3-201ENST00000525742 1516 ntBASIC22.01■■□□□ 1.11
CDH4P55283 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH4P55283 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDH4P55283 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.01■■□□□ 1.11
CDH4P55283 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDH4P55283 AC079140.4-201ENST00000507448 529 ntBASIC22.01■■□□□ 1.11
CDH4P55283 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CDH4P55283 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDH4P55283 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.01■■□□□ 1.11
CDH4P55283 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH4P55283 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDH4P55283 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.01■■□□□ 1.11
CDH4P55283 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CDH4P55283 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH4P55283 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH4P55283 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH4P55283 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CDH4P55283 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22■■□□□ 1.11
CDH4P55283 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDH4P55283 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH4P55283 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22■■□□□ 1.11
CDH4P55283 KRT18P5-201ENST00000436075 1291 ntBASIC22■■□□□ 1.11
CDH4P55283 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22■■□□□ 1.11
CDH4P55283 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22■■□□□ 1.11
CDH4P55283 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH4P55283 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22■■□□□ 1.11
CDH4P55283 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH4P55283 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22■■□□□ 1.11
CDH4P55283 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH4P55283 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.99■■□□□ 1.11
CDH4P55283 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH4P55283 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.99■■□□□ 1.11
CDH4P55283 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.99■■□□□ 1.11
CDH4P55283 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH4P55283 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.99■■□□□ 1.11
CDH4P55283 NTF6G-201ENST00000591094 616 ntBASIC21.99■■□□□ 1.11
CDH4P55283 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH4P55283 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH4P55283 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH4P55283 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDH4P55283 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
CDH4P55283 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH4P55283 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.98■■□□□ 1.11
CDH4P55283 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.98■■□□□ 1.11
CDH4P55283 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.98■■□□□ 1.11
CDH4P55283 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.98■■□□□ 1.11
CDH4P55283 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CDH4P55283 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.98■■□□□ 1.11
CDH4P55283 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDH4P55283 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH4P55283 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDH4P55283 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDH4P55283 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH4P55283 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.97■■□□□ 1.11
CDH4P55283 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
CDH4P55283 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH4P55283 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH4P55283 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.97■■□□□ 1.11
CDH4P55283 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH4P55283 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH4P55283 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH4P55283 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH4P55283 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH4P55283 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH4P55283 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH4P55283 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 AC133561.1-201ENST00000568600 2415 ntBASIC21.96■■□□□ 1.11
CDH4P55283 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
CDH4P55283 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDH4P55283 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.96■■□□□ 1.11
CDH4P55283 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH4P55283 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms