Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ATN1P54259 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.85■■□□□ 1.41
ATN1P54259 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.85■■□□□ 1.41
ATN1P54259 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.85■■□□□ 1.41
ATN1P54259 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.85■■□□□ 1.41
ATN1P54259 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
ATN1P54259 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
ATN1P54259 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.85■■□□□ 1.41
ATN1P54259 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.85■■□□□ 1.41
ATN1P54259 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.85■■□□□ 1.41
ATN1P54259 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ATN1P54259 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ATN1P54259 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ATN1P54259 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.84■■□□□ 1.41
ATN1P54259 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
ATN1P54259 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.84■■□□□ 1.41
ATN1P54259 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.84■■□□□ 1.41
ATN1P54259 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ATN1P54259 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ATN1P54259 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.83■■□□□ 1.41
ATN1P54259 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ATN1P54259 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.83■■□□□ 1.41
ATN1P54259 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.83■■□□□ 1.41
ATN1P54259 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ATN1P54259 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
ATN1P54259 AC128676.1-201ENST00000454392 318 ntBASIC23.83■■□□□ 1.41
ATN1P54259 AC097658.1-201ENST00000475555 843 ntBASIC23.83■■□□□ 1.41
ATN1P54259 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.83■■□□□ 1.41
ATN1P54259 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.83■■□□□ 1.41
ATN1P54259 AC069236.1-201ENST00000604339 616 ntBASIC23.83■■□□□ 1.41
ATN1P54259 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ATN1P54259 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
ATN1P54259 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATN1P54259 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATN1P54259 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.82■■□□□ 1.4
ATN1P54259 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATN1P54259 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.82■■□□□ 1.4
ATN1P54259 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ATN1P54259 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ATN1P54259 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.82■■□□□ 1.4
ATN1P54259 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATN1P54259 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
ATN1P54259 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
ATN1P54259 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATN1P54259 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATN1P54259 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATN1P54259 AL512625.2-201ENST00000417533 625 ntBASIC23.81■■□□□ 1.4
ATN1P54259 AC007322.4-201ENST00000509611 723 ntBASIC23.81■■□□□ 1.4
ATN1P54259 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.81■■□□□ 1.4
ATN1P54259 MYC-209ENST00000641252 345 ntBASIC23.81■■□□□ 1.4
ATN1P54259 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.81■■□□□ 1.4
ATN1P54259 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.81■■□□□ 1.4
ATN1P54259 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATN1P54259 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATN1P54259 AP004607.7-201ENST00000527152 1677 ntBASIC23.8■■□□□ 1.4
ATN1P54259 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATN1P54259 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATN1P54259 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.8■■□□□ 1.4
ATN1P54259 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.8■■□□□ 1.4
ATN1P54259 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATN1P54259 AC004812.2-201ENST00000611079 2094 ntBASIC23.8■■□□□ 1.4
ATN1P54259 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.8■■□□□ 1.4
ATN1P54259 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATN1P54259 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.8■■□□□ 1.4
ATN1P54259 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATN1P54259 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATN1P54259 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.79■■□□□ 1.4
ATN1P54259 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ATN1P54259 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATN1P54259 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ATN1P54259 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.79■■□□□ 1.4
ATN1P54259 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATN1P54259 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.79■■□□□ 1.4
ATN1P54259 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.79■■□□□ 1.4
ATN1P54259 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATN1P54259 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.79■■□□□ 1.4
ATN1P54259 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATN1P54259 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
ATN1P54259 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATN1P54259 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.78■■□□□ 1.4
ATN1P54259 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ATN1P54259 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
ATN1P54259 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ATN1P54259 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATN1P54259 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATN1P54259 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATN1P54259 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ATN1P54259 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.78■■□□□ 1.4
ATN1P54259 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.78■■□□□ 1.4
ATN1P54259 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.78■■□□□ 1.4
ATN1P54259 UNC93B4-201ENST00000505679 747 ntBASIC23.78■■□□□ 1.4
ATN1P54259 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.78■■□□□ 1.4
ATN1P54259 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ATN1P54259 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.78■■□□□ 1.4
ATN1P54259 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATN1P54259 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.77■■□□□ 1.4
ATN1P54259 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.77■■□□□ 1.4
ATN1P54259 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ATN1P54259 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATN1P54259 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms