Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CLTCL1P53675 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CLTCL1P53675 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
CLTCL1P53675 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CLTCL1P53675 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLTCL1P53675 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CLTCL1P53675 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CLTCL1P53675 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLTCL1P53675 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CLTCL1P53675 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.08■■■□□ 2.57
CLTCL1P53675 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLTCL1P53675 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.07■■■□□ 2.56
CLTCL1P53675 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLTCL1P53675 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLTCL1P53675 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CLTCL1P53675 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CLTCL1P53675 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLTCL1P53675 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CLTCL1P53675 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC31.06■■■□□ 2.56
CLTCL1P53675 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.06■■■□□ 2.56
CLTCL1P53675 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CLTCL1P53675 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31.06■■■□□ 2.56
CLTCL1P53675 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLTCL1P53675 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLTCL1P53675 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.06■■■□□ 2.56
CLTCL1P53675 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLTCL1P53675 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLTCL1P53675 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC31.05■■■□□ 2.56
CLTCL1P53675 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLTCL1P53675 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.05■■■□□ 2.56
CLTCL1P53675 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
CLTCL1P53675 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLTCL1P53675 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.05■■■□□ 2.56
CLTCL1P53675 AC137767.1-201ENST00000602918 1920 ntBASIC31.05■■■□□ 2.56
CLTCL1P53675 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC31.04■■■□□ 2.56
CLTCL1P53675 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.04■■■□□ 2.56
CLTCL1P53675 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC31.04■■■□□ 2.56
CLTCL1P53675 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CLTCL1P53675 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CLTCL1P53675 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLTCL1P53675 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLTCL1P53675 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLTCL1P53675 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLTCL1P53675 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CLTCL1P53675 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLTCL1P53675 AC083906.2-201ENST00000511578 360 ntBASIC31.03■■■□□ 2.56
CLTCL1P53675 AC013268.1-206ENST00000638368 961 ntBASIC31.03■■■□□ 2.56
CLTCL1P53675 AC112229.1-201ENST00000639295 961 ntBASIC31.03■■■□□ 2.56
CLTCL1P53675 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC31.03■■■□□ 2.56
CLTCL1P53675 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC31.03■■■□□ 2.56
CLTCL1P53675 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC31.03■■■□□ 2.56
CLTCL1P53675 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CLTCL1P53675 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CLTCL1P53675 AC093323.1-202ENST00000635031 2045 ntBASIC31.02■■■□□ 2.56
CLTCL1P53675 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CLTCL1P53675 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CLTCL1P53675 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
CLTCL1P53675 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CLTCL1P53675 MIR4651-201ENST00000582622 73 ntBASIC31.02■■■□□ 2.56
CLTCL1P53675 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC31.02■■■□□ 2.56
CLTCL1P53675 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
CLTCL1P53675 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC31.01■■■□□ 2.56
CLTCL1P53675 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.56
CLTCL1P53675 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CLTCL1P53675 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.01■■■□□ 2.55
CLTCL1P53675 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CLTCL1P53675 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CLTCL1P53675 AC007322.4-201ENST00000509611 723 ntBASIC31.01■■■□□ 2.55
CLTCL1P53675 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
CLTCL1P53675 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC31.01■■■□□ 2.55
CLTCL1P53675 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC31.01■■■□□ 2.55
CLTCL1P53675 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CLTCL1P53675 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31■■■□□ 2.55
CLTCL1P53675 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CLTCL1P53675 AC069152.1-201ENST00000438030 544 ntBASIC31■■■□□ 2.55
CLTCL1P53675 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC31■■■□□ 2.55
CLTCL1P53675 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CLTCL1P53675 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CLTCL1P53675 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31■■■□□ 2.55
CLTCL1P53675 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC30.99■■■□□ 2.55
CLTCL1P53675 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CLTCL1P53675 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.99■■■□□ 2.55
CLTCL1P53675 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLTCL1P53675 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLTCL1P53675 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.99■■■□□ 2.55
CLTCL1P53675 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CLTCL1P53675 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.98■■■□□ 2.55
CLTCL1P53675 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC30.98■■■□□ 2.55
CLTCL1P53675 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC30.98■■■□□ 2.55
CLTCL1P53675 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC30.98■■■□□ 2.55
CLTCL1P53675 KRT18P6-201ENST00000555540 1265 ntBASIC30.98■■■□□ 2.55
CLTCL1P53675 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC30.98■■■□□ 2.55
CLTCL1P53675 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.98■■■□□ 2.55
CLTCL1P53675 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.98■■■□□ 2.55
CLTCL1P53675 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms