Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC25A1P53007 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SLC25A1P53007 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC25A1P53007 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC25A1P53007 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC25A1P53007 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC25A1P53007 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC25A1P53007 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC25A1P53007 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
SLC25A1P53007 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.08■□□□□ 0.64
SLC25A1P53007 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC25A1P53007 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.08■□□□□ 0.64
SLC25A1P53007 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SLC25A1P53007 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC25A1P53007 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC25A1P53007 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC25A1P53007 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC25A1P53007 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SLC25A1P53007 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLC25A1P53007 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC25A1P53007 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 SERBP1P1-201ENST00000396021 1160 ntBASIC19.07■□□□□ 0.64
SLC25A1P53007 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.07■□□□□ 0.64
SLC25A1P53007 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC25A1P53007 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC25A1P53007 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SLC25A1P53007 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC25A1P53007 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC25A1P53007 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 SYT6-210ENST00000641643 1587 ntBASIC19.06■□□□□ 0.64
SLC25A1P53007 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC25A1P53007 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC25A1P53007 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC25A1P53007 AP005435.1-201ENST00000529293 1178 ntBASIC19.06■□□□□ 0.64
SLC25A1P53007 AC136469.2-201ENST00000623944 1028 ntBASIC19.06■□□□□ 0.64
SLC25A1P53007 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC25A1P53007 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC25A1P53007 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC25A1P53007 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLC25A1P53007 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC25A1P53007 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC25A1P53007 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC25A1P53007 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC25A1P53007 AL356441.2-201ENST00000443009 864 ntBASIC19.05■□□□□ 0.64
SLC25A1P53007 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC25A1P53007 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC25A1P53007 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC25A1P53007 AC011298.3-201ENST00000615796 283 ntBASIC19.05■□□□□ 0.64
SLC25A1P53007 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.05■□□□□ 0.64
SLC25A1P53007 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC25A1P53007 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC25A1P53007 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC25A1P53007 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC25A1P53007 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC25A1P53007 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC25A1P53007 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC25A1P53007 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC25A1P53007 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC25A1P53007 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC25A1P53007 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC25A1P53007 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC25A1P53007 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC25A1P53007 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC25A1P53007 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC25A1P53007 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC25A1P53007 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC25A1P53007 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SLC25A1P53007 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC25A1P53007 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC25A1P53007 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC25A1P53007 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC25A1P53007 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC25A1P53007 MIR4466-201ENST00000606121 54 ntBASIC19.02■□□□□ 0.64
SLC25A1P53007 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SLC25A1P53007 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms