Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGA2P52926 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGA2P52926 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HMGA2P52926 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGA2P52926 pRNA.6-201ENST00000610482 90 ntBASIC19.62■□□□□ 0.73
HMGA2P52926 pRNA.5-201ENST00000612139 90 ntBASIC19.62■□□□□ 0.73
HMGA2P52926 pRNA.11-201ENST00000618423 90 ntBASIC19.62■□□□□ 0.73
HMGA2P52926 pRNA.13-201ENST00000619112 90 ntBASIC19.62■□□□□ 0.73
HMGA2P52926 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HMGA2P52926 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMGA2P52926 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HMGA2P52926 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGA2P52926 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGA2P52926 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGA2P52926 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 AL157384.1-201ENST00000445995 2473 ntBASIC19.61■□□□□ 0.73
HMGA2P52926 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGA2P52926 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
HMGA2P52926 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HMGA2P52926 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGA2P52926 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGA2P52926 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGA2P52926 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGA2P52926 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HMGA2P52926 AC006455.2-201ENST00000429931 906 ntBASIC19.6■□□□□ 0.73
HMGA2P52926 TSPY9P-201ENST00000440215 945 ntBASIC19.6■□□□□ 0.73
HMGA2P52926 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGA2P52926 TSPY11P-201ENST00000442607 1045 ntBASIC19.6■□□□□ 0.73
HMGA2P52926 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HMGA2P52926 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGA2P52926 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGA2P52926 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGA2P52926 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGA2P52926 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGA2P52926 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGA2P52926 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGA2P52926 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HMGA2P52926 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGA2P52926 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGA2P52926 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HMGA2P52926 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGA2P52926 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGA2P52926 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HMGA2P52926 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGA2P52926 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HMGA2P52926 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGA2P52926 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGA2P52926 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGA2P52926 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMGA2P52926 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGA2P52926 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 OR2I1P-207ENST00000453522 948 ntBASIC19.58■□□□□ 0.72
HMGA2P52926 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGA2P52926 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HMGA2P52926 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
HMGA2P52926 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGA2P52926 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGA2P52926 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGA2P52926 AL049796.1-201ENST00000565336 1766 ntBASIC19.57■□□□□ 0.72
HMGA2P52926 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGA2P52926 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGA2P52926 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGA2P52926 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGA2P52926 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HMGA2P52926 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGA2P52926 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms