Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF2A1P52655 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21■□□□□ 0.95
GTF2A1P52655 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21■□□□□ 0.95
GTF2A1P52655 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF2A1P52655 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
GTF2A1P52655 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21■□□□□ 0.95
GTF2A1P52655 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
GTF2A1P52655 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21■□□□□ 0.95
GTF2A1P52655 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GTF2A1P52655 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.99■□□□□ 0.95
GTF2A1P52655 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
GTF2A1P52655 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GTF2A1P52655 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.99■□□□□ 0.95
GTF2A1P52655 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
GTF2A1P52655 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.99■□□□□ 0.95
GTF2A1P52655 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 AC079630.1-202ENST00000618127 1840 ntBASIC20.99■□□□□ 0.95
GTF2A1P52655 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GTF2A1P52655 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.98■□□□□ 0.95
GTF2A1P52655 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.98■□□□□ 0.95
GTF2A1P52655 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.98■□□□□ 0.95
GTF2A1P52655 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
GTF2A1P52655 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.98■□□□□ 0.95
GTF2A1P52655 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.98■□□□□ 0.95
GTF2A1P52655 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.98■□□□□ 0.95
GTF2A1P52655 DUX4L11-201ENST00000611504 1267 ntBASIC20.98■□□□□ 0.95
GTF2A1P52655 DUX4L12-201ENST00000614593 1267 ntBASIC20.98■□□□□ 0.95
GTF2A1P52655 DUX4L14-201ENST00000621227 1267 ntBASIC20.98■□□□□ 0.95
GTF2A1P52655 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GTF2A1P52655 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GTF2A1P52655 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF2A1P52655 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GTF2A1P52655 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GTF2A1P52655 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GTF2A1P52655 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF2A1P52655 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GTF2A1P52655 FEM1AP1-201ENST00000431297 1995 ntBASIC20.97■□□□□ 0.95
GTF2A1P52655 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.97■□□□□ 0.95
GTF2A1P52655 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
GTF2A1P52655 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GTF2A1P52655 PCDHAC2-203ENST00000615316 3011 ntBASIC20.96■□□□□ 0.95
GTF2A1P52655 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.96■□□□□ 0.95
GTF2A1P52655 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 MIR6089-201ENST00000616698 64 ntBASIC20.96■□□□□ 0.95
GTF2A1P52655 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GTF2A1P52655 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
GTF2A1P52655 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GTF2A1P52655 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
GTF2A1P52655 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF2A1P52655 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF2A1P52655 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF2A1P52655 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.95■□□□□ 0.94
GTF2A1P52655 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GTF2A1P52655 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF2A1P52655 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.95■□□□□ 0.94
GTF2A1P52655 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
GTF2A1P52655 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GTF2A1P52655 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GTF2A1P52655 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.95■□□□□ 0.94
GTF2A1P52655 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GTF2A1P52655 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GTF2A1P52655 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
GTF2A1P52655 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF2A1P52655 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
GTF2A1P52655 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF2A1P52655 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF2A1P52655 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GTF2A1P52655 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GTF2A1P52655 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 AC004408.2-201ENST00000623613 2777 ntBASIC20.93■□□□□ 0.94
GTF2A1P52655 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms