Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB5CP51148 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB5CP51148 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB5CP51148 AC026202.3-201ENST00000600805 1127 ntBASIC17.24■□□□□ 0.35
RAB5CP51148 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB5CP51148 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAB5CP51148 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB5CP51148 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB5CP51148 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB5CP51148 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RAB5CP51148 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB5CP51148 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB5CP51148 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB5CP51148 OXCT2P1-201ENST00000447263 1535 ntBASIC17.23■□□□□ 0.35
RAB5CP51148 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB5CP51148 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB5CP51148 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB5CP51148 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 RAP2CP1-202ENST00000605179 643 ntBASIC17.23■□□□□ 0.35
RAB5CP51148 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB5CP51148 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB5CP51148 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5CP51148 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5CP51148 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5CP51148 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RAB5CP51148 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5CP51148 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB5CP51148 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB5CP51148 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB5CP51148 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5CP51148 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAB5CP51148 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5CP51148 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5CP51148 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 AL020996.1-203ENST00000536896 2307 ntBASIC17.21■□□□□ 0.35
RAB5CP51148 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RAB5CP51148 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB5CP51148 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RAB5CP51148 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB5CP51148 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RAB5CP51148 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5CP51148 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB5CP51148 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB5CP51148 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAB5CP51148 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.21■□□□□ 0.34
RAB5CP51148 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.21■□□□□ 0.34
RAB5CP51148 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
RAB5CP51148 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB5CP51148 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RAB5CP51148 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
RAB5CP51148 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RAB5CP51148 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB5CP51148 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5CP51148 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB5CP51148 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAB5CP51148 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5CP51148 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5CP51148 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAB5CP51148 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB5CP51148 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms