Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SCNN1AP37088 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SCNN1AP37088 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.44■■□□□ 1.18
SCNN1AP37088 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SCNN1AP37088 AC005224.4-201ENST00000583262 1652 ntBASIC22.44■■□□□ 1.18
SCNN1AP37088 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.44■■□□□ 1.18
SCNN1AP37088 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SCNN1AP37088 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SCNN1AP37088 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.44■■□□□ 1.18
SCNN1AP37088 AC055733.4-201ENST00000638462 1354 ntBASIC22.44■■□□□ 1.18
SCNN1AP37088 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SCNN1AP37088 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SCNN1AP37088 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
SCNN1AP37088 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.43■■□□□ 1.18
SCNN1AP37088 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SCNN1AP37088 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.43■■□□□ 1.18
SCNN1AP37088 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.43■■□□□ 1.18
SCNN1AP37088 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.43■■□□□ 1.18
SCNN1AP37088 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.43■■□□□ 1.18
SCNN1AP37088 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.43■■□□□ 1.18
SCNN1AP37088 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.43■■□□□ 1.18
SCNN1AP37088 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.43■■□□□ 1.18
SCNN1AP37088 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCNN1AP37088 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SCNN1AP37088 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
SCNN1AP37088 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SCNN1AP37088 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SCNN1AP37088 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.42■■□□□ 1.18
SCNN1AP37088 ZNRF2P3-201ENST00000424200 374 ntBASIC22.42■■□□□ 1.18
SCNN1AP37088 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SCNN1AP37088 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.42■■□□□ 1.18
SCNN1AP37088 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.42■■□□□ 1.18
SCNN1AP37088 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SCNN1AP37088 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.42■■□□□ 1.18
SCNN1AP37088 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.42■■□□□ 1.18
SCNN1AP37088 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.41■■□□□ 1.18
SCNN1AP37088 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
SCNN1AP37088 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SCNN1AP37088 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.41■■□□□ 1.18
SCNN1AP37088 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.41■■□□□ 1.18
SCNN1AP37088 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.41■■□□□ 1.18
SCNN1AP37088 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.41■■□□□ 1.18
SCNN1AP37088 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SCNN1AP37088 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SCNN1AP37088 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SCNN1AP37088 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.4■■□□□ 1.18
SCNN1AP37088 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SCNN1AP37088 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SCNN1AP37088 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SCNN1AP37088 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SCNN1AP37088 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SCNN1AP37088 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.4■■□□□ 1.18
SCNN1AP37088 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.4■■□□□ 1.18
SCNN1AP37088 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.4■■□□□ 1.18
SCNN1AP37088 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SCNN1AP37088 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SCNN1AP37088 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SCNN1AP37088 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.39■■□□□ 1.18
SCNN1AP37088 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SCNN1AP37088 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
SCNN1AP37088 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.39■■□□□ 1.18
SCNN1AP37088 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SCNN1AP37088 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SCNN1AP37088 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SCNN1AP37088 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SCNN1AP37088 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SCNN1AP37088 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.39■■□□□ 1.17
SCNN1AP37088 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.39■■□□□ 1.17
SCNN1AP37088 MIR6084-201ENST00000622012 110 ntBASIC22.39■■□□□ 1.17
SCNN1AP37088 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
SCNN1AP37088 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
SCNN1AP37088 AC010542.4-201ENST00000563151 1910 ntBASIC22.39■■□□□ 1.17
SCNN1AP37088 AC026471.6-201ENST00000622954 1905 ntBASIC22.39■■□□□ 1.17
SCNN1AP37088 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SCNN1AP37088 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SCNN1AP37088 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SCNN1AP37088 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.38■■□□□ 1.17
SCNN1AP37088 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCNN1AP37088 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SCNN1AP37088 AC123595.1-201ENST00000440769 1046 ntBASIC22.38■■□□□ 1.17
SCNN1AP37088 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
SCNN1AP37088 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
SCNN1AP37088 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCNN1AP37088 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms