Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CPS1P31327 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CPS1P31327 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CPS1P31327 AC097658.1-201ENST00000475555 843 ntBASIC30.77■■■□□ 2.52
CPS1P31327 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CPS1P31327 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.77■■■□□ 2.52
CPS1P31327 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC30.77■■■□□ 2.52
CPS1P31327 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CPS1P31327 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.52
CPS1P31327 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
CPS1P31327 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CPS1P31327 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.76■■■□□ 2.51
CPS1P31327 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
CPS1P31327 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.76■■■□□ 2.51
CPS1P31327 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.76■■■□□ 2.51
CPS1P31327 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.76■■■□□ 2.51
CPS1P31327 BX276092.2-201ENST00000417668 665 ntBASIC30.75■■■□□ 2.51
CPS1P31327 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
CPS1P31327 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CPS1P31327 UNC93B5-201ENST00000530315 699 ntBASIC30.75■■■□□ 2.51
CPS1P31327 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CPS1P31327 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CPS1P31327 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.75■■■□□ 2.51
CPS1P31327 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CPS1P31327 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CPS1P31327 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CPS1P31327 AP003097.1-201ENST00000530657 1135 ntBASIC30.74■■■□□ 2.51
CPS1P31327 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.74■■■□□ 2.51
CPS1P31327 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC30.74■■■□□ 2.51
CPS1P31327 AC016405.3-201ENST00000607710 860 ntBASIC30.74■■■□□ 2.51
CPS1P31327 AL359736.2-201ENST00000621992 437 ntBASIC30.74■■■□□ 2.51
CPS1P31327 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CPS1P31327 AC091874.3-201ENST00000512672 1195 ntBASIC30.73■■■□□ 2.51
CPS1P31327 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.73■■■□□ 2.51
CPS1P31327 AL353803.4-201ENST00000565882 1934 ntBASIC30.73■■■□□ 2.51
CPS1P31327 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CPS1P31327 OXCT2P1-201ENST00000447263 1535 ntBASIC30.73■■■□□ 2.51
CPS1P31327 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CPS1P31327 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CPS1P31327 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CPS1P31327 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CPS1P31327 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.73■■■□□ 2.51
CPS1P31327 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC30.73■■■□□ 2.51
CPS1P31327 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CPS1P31327 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.72■■■□□ 2.51
CPS1P31327 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.72■■■□□ 2.51
CPS1P31327 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.72■■■□□ 2.51
CPS1P31327 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.72■■■□□ 2.51
CPS1P31327 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
CPS1P31327 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CPS1P31327 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
CPS1P31327 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CPS1P31327 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CPS1P31327 AC211429.1-201ENST00000415277 523 ntBASIC30.71■■■□□ 2.51
CPS1P31327 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.71■■■□□ 2.51
CPS1P31327 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC30.71■■■□□ 2.51
CPS1P31327 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC30.71■■■□□ 2.51
CPS1P31327 AC138907.5-202ENST00000569484 235 ntBASIC30.71■■■□□ 2.51
CPS1P31327 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.71■■■□□ 2.51
CPS1P31327 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.71■■■□□ 2.51
CPS1P31327 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CPS1P31327 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
CPS1P31327 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CPS1P31327 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
CPS1P31327 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CPS1P31327 TERF1P5-201ENST00000477545 1207 ntBASIC30.7■■■□□ 2.51
CPS1P31327 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC30.7■■■□□ 2.51
CPS1P31327 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CPS1P31327 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CPS1P31327 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CPS1P31327 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CPS1P31327 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CPS1P31327 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
CPS1P31327 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
CPS1P31327 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.69■■■□□ 2.5
CPS1P31327 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CPS1P31327 RPS20-210ENST00000523936 899 ntTSL 2 BASIC30.69■■■□□ 2.5
CPS1P31327 AC069236.1-201ENST00000604339 616 ntBASIC30.69■■■□□ 2.5
CPS1P31327 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC30.69■■■□□ 2.5
CPS1P31327 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CPS1P31327 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CPS1P31327 AC004812.2-201ENST00000611079 2094 ntBASIC30.68■■■□□ 2.5
CPS1P31327 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
CPS1P31327 BMP1-204ENST00000397814 836 ntTSL 4 BASIC30.68■■■□□ 2.5
CPS1P31327 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.68■■■□□ 2.5
CPS1P31327 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
CPS1P31327 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.68■■■□□ 2.5
CPS1P31327 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CPS1P31327 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CPS1P31327 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CPS1P31327 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CPS1P31327 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.68■■■□□ 2.5
CPS1P31327 AC020928.2-201ENST00000588717 2197 ntBASIC30.68■■■□□ 2.5
CPS1P31327 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CPS1P31327 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
CPS1P31327 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CPS1P31327 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CPS1P31327 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.67■■■□□ 2.5
CPS1P31327 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
CPS1P31327 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms