Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCK1P16333 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCK1P16333 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCK1P16333 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.26■□□□□ 0.83
NCK1P16333 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
NCK1P16333 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.26■□□□□ 0.83
NCK1P16333 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.26■□□□□ 0.83
NCK1P16333 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCK1P16333 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NCK1P16333 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCK1P16333 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NCK1P16333 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.25■□□□□ 0.83
NCK1P16333 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.25■□□□□ 0.83
NCK1P16333 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCK1P16333 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NCK1P16333 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NCK1P16333 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NCK1P16333 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NCK1P16333 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCK1P16333 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
NCK1P16333 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NCK1P16333 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCK1P16333 C17orf82-201ENST00000623772 1530 ntBASIC20.23■□□□□ 0.83
NCK1P16333 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCK1P16333 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCK1P16333 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NCK1P16333 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.23■□□□□ 0.83
NCK1P16333 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NCK1P16333 AC012354.3-201ENST00000623734 483 ntBASIC20.23■□□□□ 0.83
NCK1P16333 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NCK1P16333 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCK1P16333 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCK1P16333 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCK1P16333 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.22■□□□□ 0.83
NCK1P16333 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.22■□□□□ 0.83
NCK1P16333 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NCK1P16333 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NCK1P16333 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.22■□□□□ 0.83
NCK1P16333 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NCK1P16333 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.22■□□□□ 0.83
NCK1P16333 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.22■□□□□ 0.83
NCK1P16333 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NCK1P16333 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.22■□□□□ 0.83
NCK1P16333 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCK1P16333 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCK1P16333 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.21■□□□□ 0.83
NCK1P16333 LINC01521-201ENST00000504184 1943 ntBASIC20.21■□□□□ 0.83
NCK1P16333 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.21■□□□□ 0.83
NCK1P16333 BX664725.1-201ENST00000438252 379 ntBASIC20.21■□□□□ 0.83
NCK1P16333 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.21■□□□□ 0.83
NCK1P16333 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCK1P16333 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCK1P16333 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NCK1P16333 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.21■□□□□ 0.83
NCK1P16333 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCK1P16333 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.2■□□□□ 0.82
NCK1P16333 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
NCK1P16333 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.2■□□□□ 0.82
NCK1P16333 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NCK1P16333 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.2■□□□□ 0.82
NCK1P16333 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NCK1P16333 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCK1P16333 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
NCK1P16333 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NCK1P16333 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms