Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH1P12830 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH1P12830 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH1P12830 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH1P12830 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH1P12830 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CDH1P12830 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH1P12830 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH1P12830 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDH1P12830 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH1P12830 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH1P12830 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH1P12830 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH1P12830 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDH1P12830 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH1P12830 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH1P12830 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDH1P12830 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH1P12830 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
CDH1P12830 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH1P12830 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH1P12830 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH1P12830 TSPY26P-201ENST00000476365 1326 ntBASIC20.89■□□□□ 0.93
CDH1P12830 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH1P12830 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH1P12830 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH1P12830 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.89■□□□□ 0.93
CDH1P12830 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDH1P12830 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH1P12830 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH1P12830 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH1P12830 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH1P12830 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH1P12830 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH1P12830 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH1P12830 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH1P12830 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH1P12830 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH1P12830 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH1P12830 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH1P12830 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.88■□□□□ 0.93
CDH1P12830 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH1P12830 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH1P12830 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDH1P12830 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH1P12830 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDH1P12830 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH1P12830 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH1P12830 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH1P12830 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH1P12830 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH1P12830 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH1P12830 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH1P12830 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH1P12830 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH1P12830 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH1P12830 OR7E47P-201ENST00000546390 1422 ntBASIC20.87■□□□□ 0.93
CDH1P12830 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH1P12830 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH1P12830 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH1P12830 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH1P12830 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.86■□□□□ 0.93
CDH1P12830 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.86■□□□□ 0.93
CDH1P12830 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.86■□□□□ 0.93
CDH1P12830 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH1P12830 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CDH1P12830 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH1P12830 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH1P12830 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH1P12830 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH1P12830 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH1P12830 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH1P12830 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH1P12830 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH1P12830 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
CDH1P12830 PKD1P6-201ENST00000343738 4769 ntBASIC20.85■□□□□ 0.93
CDH1P12830 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH1P12830 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH1P12830 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH1P12830 FBXW4P1-201ENST00000426721 2239 ntBASIC20.85■□□□□ 0.93
CDH1P12830 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH1P12830 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH1P12830 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH1P12830 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH1P12830 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH1P12830 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDH1P12830 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH1P12830 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH1P12830 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH1P12830 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH1P12830 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDH1P12830 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms