Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR7E47P-201ENST00000546390 1422 ntBASIC19.55■□□□□ 0.72
FREM3P0C091 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FREM3P0C091 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.55■□□□□ 0.72
FREM3P0C091 AC090192.1-201ENST00000517740 490 ntBASIC19.55■□□□□ 0.72
FREM3P0C091 AL034346.1-201ENST00000568244 1277 ntBASIC19.55■□□□□ 0.72
FREM3P0C091 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.55■□□□□ 0.72
FREM3P0C091 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.54■□□□□ 0.72
FREM3P0C091 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.54■□□□□ 0.72
FREM3P0C091 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.54■□□□□ 0.72
FREM3P0C091 AP004607.4-201ENST00000530158 1459 ntBASIC19.54■□□□□ 0.72
FREM3P0C091 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FREM3P0C091 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.54■□□□□ 0.72
FREM3P0C091 AC079089.2-201ENST00000531211 1277 ntBASIC19.54■□□□□ 0.72
FREM3P0C091 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.54■□□□□ 0.72
FREM3P0C091 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FREM3P0C091 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
FREM3P0C091 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FREM3P0C091 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FREM3P0C091 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FREM3P0C091 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FREM3P0C091 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FREM3P0C091 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.52■□□□□ 0.72
FREM3P0C091 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.52■□□□□ 0.72
FREM3P0C091 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FREM3P0C091 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FREM3P0C091 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
FREM3P0C091 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FREM3P0C091 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FREM3P0C091 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.52■□□□□ 0.72
FREM3P0C091 AC004854.2-201ENST00000608450 1441 ntBASIC19.52■□□□□ 0.72
FREM3P0C091 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FREM3P0C091 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.52■□□□□ 0.72
FREM3P0C091 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FREM3P0C091 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.52■□□□□ 0.72
FREM3P0C091 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FREM3P0C091 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
FREM3P0C091 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
FREM3P0C091 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.51■□□□□ 0.71
FREM3P0C091 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.51■□□□□ 0.71
FREM3P0C091 AC079834.2-201ENST00000609776 1949 ntBASIC19.51■□□□□ 0.71
FREM3P0C091 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.51■□□□□ 0.71
FREM3P0C091 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.51■□□□□ 0.71
FREM3P0C091 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.51■□□□□ 0.71
FREM3P0C091 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
FREM3P0C091 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.51■□□□□ 0.71
FREM3P0C091 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.51■□□□□ 0.71
FREM3P0C091 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 AC009237.3-201ENST00000393279 1427 ntBASIC19.51■□□□□ 0.71
FREM3P0C091 ESRRAP2-201ENST00000418437 1549 ntBASIC19.51■□□□□ 0.71
FREM3P0C091 AC137767.1-201ENST00000602918 1920 ntBASIC19.51■□□□□ 0.71
FREM3P0C091 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.51■□□□□ 0.71
FREM3P0C091 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.51■□□□□ 0.71
FREM3P0C091 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.51■□□□□ 0.71
FREM3P0C091 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FREM3P0C091 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
FREM3P0C091 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.51■□□□□ 0.71
FREM3P0C091 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.51■□□□□ 0.71
FREM3P0C091 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
FREM3P0C091 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.5■□□□□ 0.71
FREM3P0C091 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.5■□□□□ 0.71
FREM3P0C091 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.5■□□□□ 0.71
FREM3P0C091 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
FREM3P0C091 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
FREM3P0C091 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.5■□□□□ 0.71
FREM3P0C091 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms