Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HOXC6P09630 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HOXC6P09630 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.42■■□□□ 1.5
HOXC6P09630 TERF1P5-201ENST00000477545 1207 ntBASIC24.42■■□□□ 1.5
HOXC6P09630 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.42■■□□□ 1.5
HOXC6P09630 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.42■■□□□ 1.5
HOXC6P09630 MIR4758-201ENST00000577688 71 ntBASIC24.42■■□□□ 1.5
HOXC6P09630 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.42■■□□□ 1.5
HOXC6P09630 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.42■■□□□ 1.5
HOXC6P09630 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.42■■□□□ 1.5
HOXC6P09630 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HOXC6P09630 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HOXC6P09630 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
HOXC6P09630 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HOXC6P09630 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
HOXC6P09630 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.41■■□□□ 1.5
HOXC6P09630 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HOXC6P09630 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
HOXC6P09630 AC007322.4-201ENST00000509611 723 ntBASIC24.41■■□□□ 1.5
HOXC6P09630 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.41■■□□□ 1.5
HOXC6P09630 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.41■■□□□ 1.5
HOXC6P09630 EEF1DP3-203ENST00000566025 782 ntBASIC24.41■■□□□ 1.5
HOXC6P09630 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HOXC6P09630 AC068338.2-201ENST00000563278 1430 ntBASIC24.41■■□□□ 1.5
HOXC6P09630 AP004607.7-201ENST00000527152 1677 ntBASIC24.4■■□□□ 1.5
HOXC6P09630 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
HOXC6P09630 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.4■■□□□ 1.5
HOXC6P09630 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
HOXC6P09630 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HOXC6P09630 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
HOXC6P09630 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.4■■□□□ 1.5
HOXC6P09630 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.4■■□□□ 1.5
HOXC6P09630 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.4■■□□□ 1.5
HOXC6P09630 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.4■■□□□ 1.5
HOXC6P09630 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.4■■□□□ 1.5
HOXC6P09630 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
HOXC6P09630 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HOXC6P09630 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HOXC6P09630 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
HOXC6P09630 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
HOXC6P09630 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
HOXC6P09630 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
HOXC6P09630 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
HOXC6P09630 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HOXC6P09630 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.39■■□□□ 1.5
HOXC6P09630 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.39■■□□□ 1.5
HOXC6P09630 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HOXC6P09630 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HOXC6P09630 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
HOXC6P09630 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HOXC6P09630 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.39■■□□□ 1.49
HOXC6P09630 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HOXC6P09630 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HOXC6P09630 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.39■■□□□ 1.49
HOXC6P09630 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HOXC6P09630 AC092068.2-201ENST00000590491 1708 ntBASIC24.38■■□□□ 1.49
HOXC6P09630 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
HOXC6P09630 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
HOXC6P09630 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HOXC6P09630 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.38■■□□□ 1.49
HOXC6P09630 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HOXC6P09630 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.38■■□□□ 1.49
HOXC6P09630 LINC01960-201ENST00000563759 1884 ntBASIC24.38■■□□□ 1.49
HOXC6P09630 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HOXC6P09630 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HOXC6P09630 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HOXC6P09630 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HOXC6P09630 MIPEPP3-201ENST00000412105 444 ntBASIC24.37■■□□□ 1.49
HOXC6P09630 POU5F1P3-201ENST00000428824 1078 ntBASIC24.37■■□□□ 1.49
HOXC6P09630 CYP2T1P-201ENST00000432607 1285 ntBASIC24.37■■□□□ 1.49
HOXC6P09630 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.37■■□□□ 1.49
HOXC6P09630 AC008687.6-201ENST00000596318 630 ntBASIC24.37■■□□□ 1.49
HOXC6P09630 AC053503.5-201ENST00000601508 636 ntBASIC24.37■■□□□ 1.49
HOXC6P09630 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.37■■□□□ 1.49
HOXC6P09630 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HOXC6P09630 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HOXC6P09630 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
HOXC6P09630 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HOXC6P09630 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HOXC6P09630 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HOXC6P09630 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
HOXC6P09630 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HOXC6P09630 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.36■■□□□ 1.49
HOXC6P09630 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.36■■□□□ 1.49
HOXC6P09630 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.36■■□□□ 1.49
HOXC6P09630 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.36■■□□□ 1.49
HOXC6P09630 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HOXC6P09630 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
HOXC6P09630 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HOXC6P09630 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.35■■□□□ 1.49
HOXC6P09630 ANOS2P-203ENST00000472227 1816 ntBASIC24.35■■□□□ 1.49
HOXC6P09630 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.35■■□□□ 1.49
HOXC6P09630 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HOXC6P09630 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.35■■□□□ 1.49
HOXC6P09630 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.35■■□□□ 1.49
HOXC6P09630 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.35■■□□□ 1.49
HOXC6P09630 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.35■■□□□ 1.49
HOXC6P09630 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.35■■□□□ 1.49
HOXC6P09630 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
HOXC6P09630 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms