Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.4■■□□□ 1.5
HMGCRP04035 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.4■■□□□ 1.5
HMGCRP04035 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HMGCRP04035 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HMGCRP04035 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
HMGCRP04035 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HMGCRP04035 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
HMGCRP04035 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HMGCRP04035 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
HMGCRP04035 RARRES2P4-201ENST00000514074 484 ntBASIC24.39■■□□□ 1.49
HMGCRP04035 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.39■■□□□ 1.49
HMGCRP04035 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.39■■□□□ 1.49
HMGCRP04035 DUSP8P5-201ENST00000422884 1815 ntBASIC24.39■■□□□ 1.49
HMGCRP04035 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.39■■□□□ 1.49
HMGCRP04035 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HMGCRP04035 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.38■■□□□ 1.49
HMGCRP04035 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.38■■□□□ 1.49
HMGCRP04035 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
HMGCRP04035 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCRP04035 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCRP04035 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCRP04035 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.38■■□□□ 1.49
HMGCRP04035 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCRP04035 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCRP04035 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
HMGCRP04035 AC007322.4-201ENST00000509611 723 ntBASIC24.38■■□□□ 1.49
HMGCRP04035 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.38■■□□□ 1.49
HMGCRP04035 OR10C1-204ENST00000622521 1039 ntBASIC24.38■■□□□ 1.49
HMGCRP04035 AC004812.2-201ENST00000611079 2094 ntBASIC24.38■■□□□ 1.49
HMGCRP04035 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HMGCRP04035 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HMGCRP04035 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HMGCRP04035 DUSP5P2-201ENST00000426873 1033 ntBASIC24.37■■□□□ 1.49
HMGCRP04035 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.37■■□□□ 1.49
HMGCRP04035 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.37■■□□□ 1.49
HMGCRP04035 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.37■■□□□ 1.49
HMGCRP04035 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HMGCRP04035 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
HMGCRP04035 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HMGCRP04035 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.37■■□□□ 1.49
HMGCRP04035 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HMGCRP04035 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.36■■□□□ 1.49
HMGCRP04035 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
HMGCRP04035 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
HMGCRP04035 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.36■■□□□ 1.49
HMGCRP04035 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.36■■□□□ 1.49
HMGCRP04035 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.36■■□□□ 1.49
HMGCRP04035 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HMGCRP04035 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.36■■□□□ 1.49
HMGCRP04035 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HMGCRP04035 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HMGCRP04035 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
HMGCRP04035 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.35■■□□□ 1.49
HMGCRP04035 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.35■■□□□ 1.49
HMGCRP04035 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.35■■□□□ 1.49
HMGCRP04035 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 GCSHP5-201ENST00000443090 522 ntBASIC24.35■■□□□ 1.49
HMGCRP04035 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.35■■□□□ 1.49
HMGCRP04035 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.35■■□□□ 1.49
HMGCRP04035 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.35■■□□□ 1.49
HMGCRP04035 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
HMGCRP04035 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HMGCRP04035 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.34■■□□□ 1.49
HMGCRP04035 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.34■■□□□ 1.49
HMGCRP04035 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
HMGCRP04035 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.34■■□□□ 1.49
HMGCRP04035 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.34■■□□□ 1.49
HMGCRP04035 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.34■■□□□ 1.49
HMGCRP04035 AC008694.1-202ENST00000636953 945 ntBASIC24.34■■□□□ 1.49
HMGCRP04035 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.34■■□□□ 1.49
HMGCRP04035 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
HMGCRP04035 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HMGCRP04035 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
HMGCRP04035 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HMGCRP04035 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.33■■□□□ 1.49
HMGCRP04035 AL512625.2-201ENST00000417533 625 ntBASIC24.33■■□□□ 1.49
HMGCRP04035 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
HMGCRP04035 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HMGCRP04035 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.33■■□□□ 1.49
HMGCRP04035 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.33■■□□□ 1.49
HMGCRP04035 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.33■■□□□ 1.49
HMGCRP04035 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HMGCRP04035 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HMGCRP04035 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HMGCRP04035 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.33■■□□□ 1.49
HMGCRP04035 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
HMGCRP04035 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HMGCRP04035 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
HMGCRP04035 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
HMGCRP04035 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HMGCRP04035 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms