Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 LINC00565-201ENST00000562710 2331 ntBASIC17.18■□□□□ 0.34
HLA-DRB1P01911 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 MIR572-201ENST00000384983 95 ntBASIC17.17■□□□□ 0.34
HLA-DRB1P01911 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DRB1P01911 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 AC105265.2-201ENST00000467189 838 ntBASIC17.16■□□□□ 0.34
HLA-DRB1P01911 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DRB1P01911 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DRB1P01911 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
HLA-DRB1P01911 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 AC105233.4-201ENST00000642045 216 ntBASIC17.14■□□□□ 0.33
HLA-DRB1P01911 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRB1P01911 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 AC092053.2-201ENST00000640557 1818 ntBASIC17.13■□□□□ 0.33
HLA-DRB1P01911 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 AL034346.1-201ENST00000568244 1277 ntBASIC17.13■□□□□ 0.33
HLA-DRB1P01911 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 SMUG1P1-201ENST00000590640 811 ntBASIC17.13■□□□□ 0.33
HLA-DRB1P01911 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DRB1P01911 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRB1P01911 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DRB1P01911 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms