Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C1RP00736 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
C1RP00736 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
C1RP00736 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C1RP00736 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.69■■□□□ 1.22
C1RP00736 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.69■■□□□ 1.22
C1RP00736 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.69■■□□□ 1.22
C1RP00736 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C1RP00736 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C1RP00736 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
C1RP00736 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.68■■□□□ 1.22
C1RP00736 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.68■■□□□ 1.22
C1RP00736 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.68■■□□□ 1.22
C1RP00736 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.68■■□□□ 1.22
C1RP00736 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.68■■□□□ 1.22
C1RP00736 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.68■■□□□ 1.22
C1RP00736 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.68■■□□□ 1.22
C1RP00736 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.68■■□□□ 1.22
C1RP00736 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
C1RP00736 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
C1RP00736 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.67■■□□□ 1.22
C1RP00736 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.67■■□□□ 1.22
C1RP00736 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.67■■□□□ 1.22
C1RP00736 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
C1RP00736 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
C1RP00736 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.67■■□□□ 1.22
C1RP00736 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.67■■□□□ 1.22
C1RP00736 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.67■■□□□ 1.22
C1RP00736 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.67■■□□□ 1.22
C1RP00736 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
C1RP00736 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 LINC01960-201ENST00000563759 1884 ntBASIC22.66■■□□□ 1.22
C1RP00736 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.66■■□□□ 1.22
C1RP00736 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.66■■□□□ 1.22
C1RP00736 CNN2P6-201ENST00000439038 900 ntBASIC22.66■■□□□ 1.22
C1RP00736 CD99P1-205ENST00000527459 561 ntBASIC22.66■■□□□ 1.22
C1RP00736 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.66■■□□□ 1.22
C1RP00736 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
C1RP00736 EEF1DP3-203ENST00000566025 782 ntBASIC22.66■■□□□ 1.22
C1RP00736 AC010536.3-201ENST00000620306 533 ntBASIC22.66■■□□□ 1.22
C1RP00736 TMEM191A-211ENST00000637163 1067 ntBASIC22.66■■□□□ 1.22
C1RP00736 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
C1RP00736 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.66■■□□□ 1.22
C1RP00736 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
C1RP00736 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1RP00736 AP004607.7-201ENST00000527152 1677 ntBASIC22.65■■□□□ 1.22
C1RP00736 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
C1RP00736 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
C1RP00736 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
C1RP00736 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1RP00736 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.65■■□□□ 1.22
C1RP00736 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.65■■□□□ 1.22
C1RP00736 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
C1RP00736 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.65■■□□□ 1.22
C1RP00736 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
C1RP00736 AC053503.5-201ENST00000601508 636 ntBASIC22.65■■□□□ 1.22
C1RP00736 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
C1RP00736 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1RP00736 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1RP00736 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
C1RP00736 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.65■■□□□ 1.22
C1RP00736 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
C1RP00736 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
C1RP00736 SLC29A4P1-201ENST00000398760 971 ntBASIC22.64■■□□□ 1.21
C1RP00736 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.64■■□□□ 1.21
C1RP00736 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.64■■□□□ 1.21
C1RP00736 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.64■■□□□ 1.21
C1RP00736 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
C1RP00736 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
C1RP00736 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
C1RP00736 OR7E47P-201ENST00000546390 1422 ntBASIC22.64■■□□□ 1.21
C1RP00736 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
C1RP00736 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
C1RP00736 DUSP8P5-201ENST00000422884 1815 ntBASIC22.64■■□□□ 1.21
C1RP00736 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
C1RP00736 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
C1RP00736 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms