Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.16■□□□□ 0.82
CLPTM1O96005 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLPTM1O96005 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLPTM1O96005 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CLPTM1O96005 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLPTM1O96005 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.15■□□□□ 0.82
CLPTM1O96005 Z98882.1-201ENST00000622160 2253 ntBASIC20.15■□□□□ 0.82
CLPTM1O96005 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 KRT18P24-201ENST00000344739 1156 ntBASIC20.15■□□□□ 0.82
CLPTM1O96005 THA1P-201ENST00000590384 1145 ntBASIC20.15■□□□□ 0.82
CLPTM1O96005 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.15■□□□□ 0.82
CLPTM1O96005 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 ALDH1A3-203ENST00000557963 1670 ntBASIC20.15■□□□□ 0.82
CLPTM1O96005 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLPTM1O96005 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.15■□□□□ 0.82
CLPTM1O96005 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLPTM1O96005 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLPTM1O96005 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CLPTM1O96005 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLPTM1O96005 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLPTM1O96005 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLPTM1O96005 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLPTM1O96005 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
CLPTM1O96005 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.14■□□□□ 0.81
CLPTM1O96005 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CLPTM1O96005 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLPTM1O96005 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.14■□□□□ 0.81
CLPTM1O96005 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLPTM1O96005 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CLPTM1O96005 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLPTM1O96005 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CLPTM1O96005 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLPTM1O96005 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.13■□□□□ 0.81
CLPTM1O96005 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.13■□□□□ 0.81
CLPTM1O96005 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.13■□□□□ 0.81
CLPTM1O96005 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.13■□□□□ 0.81
CLPTM1O96005 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.13■□□□□ 0.81
CLPTM1O96005 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
CLPTM1O96005 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLPTM1O96005 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLPTM1O96005 AL022069.1-201ENST00000568025 1636 ntBASIC20.13■□□□□ 0.81
CLPTM1O96005 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CLPTM1O96005 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLPTM1O96005 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLPTM1O96005 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.12■□□□□ 0.81
CLPTM1O96005 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CLPTM1O96005 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.12■□□□□ 0.81
CLPTM1O96005 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.12■□□□□ 0.81
CLPTM1O96005 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLPTM1O96005 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLPTM1O96005 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.12■□□□□ 0.81
CLPTM1O96005 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLPTM1O96005 AC009299.2-201ENST00000482477 511 ntBASIC20.12■□□□□ 0.81
CLPTM1O96005 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLPTM1O96005 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.12■□□□□ 0.81
CLPTM1O96005 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.12■□□□□ 0.81
CLPTM1O96005 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLPTM1O96005 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.12■□□□□ 0.81
CLPTM1O96005 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLPTM1O96005 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CLPTM1O96005 AL353803.4-201ENST00000565882 1934 ntBASIC20.11■□□□□ 0.81
CLPTM1O96005 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPTM1O96005 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms