Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 GCSHP5-201ENST00000443090 522 ntBASIC19.15■□□□□ 0.66
CLDN1O95832 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.15■□□□□ 0.66
CLDN1O95832 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN1O95832 MIR4758-201ENST00000577688 71 ntBASIC19.15■□□□□ 0.66
CLDN1O95832 MYCNOS-205ENST00000641950 531 ntBASIC19.15■□□□□ 0.66
CLDN1O95832 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN1O95832 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN1O95832 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN1O95832 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN1O95832 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CLDN1O95832 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CLDN1O95832 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CLDN1O95832 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN1O95832 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN1O95832 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN1O95832 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN1O95832 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN1O95832 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN1O95832 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN1O95832 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN1O95832 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN1O95832 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLDN1O95832 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN1O95832 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 KRT87P-202ENST00000534226 1464 ntBASIC19.13■□□□□ 0.65
CLDN1O95832 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN1O95832 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN1O95832 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN1O95832 AC133561.1-201ENST00000568600 2415 ntBASIC19.12■□□□□ 0.65
CLDN1O95832 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN1O95832 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLDN1O95832 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN1O95832 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN1O95832 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN1O95832 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN1O95832 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN1O95832 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN1O95832 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN1O95832 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN1O95832 RARRES2P4-201ENST00000514074 484 ntBASIC19.12■□□□□ 0.65
CLDN1O95832 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN1O95832 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CLDN1O95832 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN1O95832 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN1O95832 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN1O95832 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN1O95832 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN1O95832 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLDN1O95832 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLDN1O95832 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN1O95832 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN1O95832 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN1O95832 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLDN1O95832 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN1O95832 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN1O95832 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN1O95832 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN1O95832 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN1O95832 RPS2P4-201ENST00000476944 856 ntBASIC19.11■□□□□ 0.65
CLDN1O95832 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLDN1O95832 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLDN1O95832 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLDN1O95832 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLDN1O95832 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN1O95832 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
CLDN1O95832 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN1O95832 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN1O95832 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN1O95832 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN1O95832 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN1O95832 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN1O95832 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN1O95832 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN1O95832 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN1O95832 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CLDN1O95832 AC068587.7-201ENST00000641602 218 ntBASIC19.1■□□□□ 0.65
CLDN1O95832 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN1O95832 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN1O95832 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN1O95832 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLDN1O95832 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN1O95832 MIPEPP3-201ENST00000412105 444 ntBASIC19.09■□□□□ 0.65
CLDN1O95832 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.09■□□□□ 0.65
CLDN1O95832 AL158047.1-201ENST00000445918 881 ntBASIC19.09■□□□□ 0.65
CLDN1O95832 AC010141.3-201ENST00000456659 717 ntBASIC19.09■□□□□ 0.65
CLDN1O95832 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN1O95832 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN1O95832 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms