Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CXCL13O43927 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CXCL13O43927 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.24■□□□□ 0.67
CXCL13O43927 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
CXCL13O43927 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.24■□□□□ 0.67
CXCL13O43927 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.24■□□□□ 0.67
CXCL13O43927 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
CXCL13O43927 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.24■□□□□ 0.67
CXCL13O43927 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.24■□□□□ 0.67
CXCL13O43927 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.24■□□□□ 0.67
CXCL13O43927 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL13O43927 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCL13O43927 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CXCL13O43927 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CXCL13O43927 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCL13O43927 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CXCL13O43927 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.23■□□□□ 0.67
CXCL13O43927 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCL13O43927 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.23■□□□□ 0.67
CXCL13O43927 AL162430.1-201ENST00000480705 870 ntBASIC19.23■□□□□ 0.67
CXCL13O43927 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCL13O43927 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CXCL13O43927 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCL13O43927 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.23■□□□□ 0.67
CXCL13O43927 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CXCL13O43927 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CXCL13O43927 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL13O43927 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCL13O43927 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CXCL13O43927 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CXCL13O43927 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CXCL13O43927 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CXCL13O43927 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCL13O43927 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCL13O43927 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.22■□□□□ 0.67
CXCL13O43927 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCL13O43927 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL13O43927 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL13O43927 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL13O43927 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL13O43927 AC242852.2-201ENST00000615738 1807 ntBASIC19.21■□□□□ 0.67
CXCL13O43927 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL13O43927 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCL13O43927 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.21■□□□□ 0.67
CXCL13O43927 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCL13O43927 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.21■□□□□ 0.67
CXCL13O43927 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.21■□□□□ 0.67
CXCL13O43927 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCL13O43927 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.21■□□□□ 0.67
CXCL13O43927 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL13O43927 AC012676.1-201ENST00000574705 1949 ntBASIC19.21■□□□□ 0.67
CXCL13O43927 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL13O43927 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.21■□□□□ 0.67
CXCL13O43927 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL13O43927 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCL13O43927 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCL13O43927 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.2■□□□□ 0.66
CXCL13O43927 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 AC079140.4-201ENST00000507448 529 ntBASIC19.2■□□□□ 0.66
CXCL13O43927 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.2■□□□□ 0.66
CXCL13O43927 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.2■□□□□ 0.66
CXCL13O43927 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.2■□□□□ 0.66
CXCL13O43927 AC092053.2-201ENST00000640557 1818 ntBASIC19.2■□□□□ 0.66
CXCL13O43927 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.2■□□□□ 0.66
CXCL13O43927 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.2■□□□□ 0.66
CXCL13O43927 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL13O43927 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms