Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IDH3BO43837 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IDH3BO43837 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
IDH3BO43837 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IDH3BO43837 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IDH3BO43837 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IDH3BO43837 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.59■□□□□ 0.73
IDH3BO43837 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
IDH3BO43837 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
IDH3BO43837 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 AL117332.1-201ENST00000622628 974 ntBASIC19.59■□□□□ 0.73
IDH3BO43837 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
IDH3BO43837 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IDH3BO43837 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.59■□□□□ 0.73
IDH3BO43837 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IDH3BO43837 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
IDH3BO43837 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.58■□□□□ 0.73
IDH3BO43837 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IDH3BO43837 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.58■□□□□ 0.73
IDH3BO43837 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IDH3BO43837 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IDH3BO43837 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IDH3BO43837 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.58■□□□□ 0.72
IDH3BO43837 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IDH3BO43837 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IDH3BO43837 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.58■□□□□ 0.72
IDH3BO43837 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IDH3BO43837 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IDH3BO43837 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.57■□□□□ 0.72
IDH3BO43837 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
IDH3BO43837 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
IDH3BO43837 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IDH3BO43837 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.57■□□□□ 0.72
IDH3BO43837 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.57■□□□□ 0.72
IDH3BO43837 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
IDH3BO43837 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.57■□□□□ 0.72
IDH3BO43837 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
IDH3BO43837 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
IDH3BO43837 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
IDH3BO43837 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IDH3BO43837 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.56■□□□□ 0.72
IDH3BO43837 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.56■□□□□ 0.72
IDH3BO43837 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
IDH3BO43837 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.56■□□□□ 0.72
IDH3BO43837 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.56■□□□□ 0.72
IDH3BO43837 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.56■□□□□ 0.72
IDH3BO43837 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
IDH3BO43837 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IDH3BO43837 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.56■□□□□ 0.72
IDH3BO43837 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IDH3BO43837 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IDH3BO43837 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IDH3BO43837 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IDH3BO43837 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IDH3BO43837 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IDH3BO43837 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IDH3BO43837 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.55■□□□□ 0.72
IDH3BO43837 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.55■□□□□ 0.72
IDH3BO43837 AL451085.2-201ENST00000605085 799 ntBASIC19.55■□□□□ 0.72
IDH3BO43837 AF106564.1-201ENST00000607058 2553 ntBASIC19.55■□□□□ 0.72
IDH3BO43837 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IDH3BO43837 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
IDH3BO43837 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IDH3BO43837 FBXW4P1-201ENST00000426721 2239 ntBASIC19.55■□□□□ 0.72
IDH3BO43837 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
IDH3BO43837 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
IDH3BO43837 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IDH3BO43837 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IDH3BO43837 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.54■□□□□ 0.72
IDH3BO43837 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IDH3BO43837 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IDH3BO43837 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IDH3BO43837 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
IDH3BO43837 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms