Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC008694.1-202ENST00000636953 945 ntBASIC35.48■■■■□ 3.27
CHD1O14646 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC35.48■■■■□ 3.27
CHD1O14646 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC35.47■■■■□ 3.27
CHD1O14646 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC35.47■■■■□ 3.27
CHD1O14646 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CHD1O14646 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC35.47■■■■□ 3.27
CHD1O14646 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
CHD1O14646 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC35.46■■■■□ 3.27
CHD1O14646 USP45-205ENST00000472914 1617 ntTSL 5 BASIC35.46■■■■□ 3.27
CHD1O14646 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC35.46■■■■□ 3.27
CHD1O14646 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CHD1O14646 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
CHD1O14646 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
CHD1O14646 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CHD1O14646 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC35.45■■■■□ 3.27
CHD1O14646 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CHD1O14646 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC35.45■■■■□ 3.27
CHD1O14646 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CHD1O14646 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC35.45■■■■□ 3.27
CHD1O14646 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC35.45■■■■□ 3.26
CHD1O14646 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CHD1O14646 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC35.44■■■■□ 3.26
CHD1O14646 MDFI-202ENST00000373050 809 ntTSL 2 BASIC35.44■■■■□ 3.26
CHD1O14646 SERPINH1P1-201ENST00000419794 1249 ntBASIC35.44■■■■□ 3.26
CHD1O14646 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC35.44■■■■□ 3.26
CHD1O14646 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CHD1O14646 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CHD1O14646 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CHD1O14646 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC35.43■■■■□ 3.26
CHD1O14646 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC35.43■■■■□ 3.26
CHD1O14646 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC35.43■■■■□ 3.26
CHD1O14646 EEF1DP3-203ENST00000566025 782 ntBASIC35.43■■■■□ 3.26
CHD1O14646 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
CHD1O14646 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC35.43■■■■□ 3.26
CHD1O14646 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC35.43■■■■□ 3.26
CHD1O14646 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC35.43■■■■□ 3.26
CHD1O14646 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CHD1O14646 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC35.43■■■■□ 3.26
CHD1O14646 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC35.43■■■■□ 3.26
CHD1O14646 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CHD1O14646 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC35.43■■■■□ 3.26
CHD1O14646 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC35.42■■■■□ 3.26
CHD1O14646 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
CHD1O14646 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
CHD1O14646 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC35.42■■■■□ 3.26
CHD1O14646 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC35.42■■■■□ 3.26
CHD1O14646 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC35.42■■■■□ 3.26
CHD1O14646 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC35.42■■■■□ 3.26
CHD1O14646 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC35.41■■■■□ 3.26
CHD1O14646 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC35.41■■■■□ 3.26
CHD1O14646 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CHD1O14646 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CHD1O14646 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC35.41■■■■□ 3.26
CHD1O14646 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CHD1O14646 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC35.41■■■■□ 3.26
CHD1O14646 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
CHD1O14646 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC35.4■■■■□ 3.26
CHD1O14646 OR2A1-AS1-201ENST00000462305 773 ntBASIC35.4■■■■□ 3.26
CHD1O14646 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC35.4■■■■□ 3.26
CHD1O14646 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CHD1O14646 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC35.4■■■■□ 3.26
CHD1O14646 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
CHD1O14646 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC35.4■■■■□ 3.26
CHD1O14646 RPPH1-201ENST00000516869 333 ntBASIC35.4■■■■□ 3.26
CHD1O14646 C1QBPP2-201ENST00000528754 825 ntBASIC35.4■■■■□ 3.26
CHD1O14646 BX088651.1-201ENST00000540551 451 ntBASIC35.4■■■■□ 3.26
CHD1O14646 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC35.4■■■■□ 3.26
CHD1O14646 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC35.4■■■■□ 3.26
CHD1O14646 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC35.39■■■■□ 3.26
CHD1O14646 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC35.39■■■■□ 3.26
CHD1O14646 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC35.39■■■■□ 3.26
CHD1O14646 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CHD1O14646 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC35.39■■■■□ 3.26
CHD1O14646 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC35.39■■■■□ 3.26
CHD1O14646 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC35.39■■■■□ 3.26
CHD1O14646 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CHD1O14646 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CHD1O14646 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC35.38■■■■□ 3.25
CHD1O14646 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC35.38■■■■□ 3.25
CHD1O14646 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC35.38■■■■□ 3.25
CHD1O14646 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CHD1O14646 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CHD1O14646 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CHD1O14646 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC35.38■■■■□ 3.25
CHD1O14646 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CHD1O14646 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC35.37■■■■□ 3.25
CHD1O14646 AC060766.5-201ENST00000590539 871 ntBASIC35.37■■■■□ 3.25
CHD1O14646 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC35.37■■■■□ 3.25
CHD1O14646 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CHD1O14646 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CHD1O14646 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC35.37■■■■□ 3.25
CHD1O14646 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CHD1O14646 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC35.36■■■■□ 3.25
CHD1O14646 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CHD1O14646 FXN-202ENST00000396364 980 ntTSL 5 BASIC35.36■■■■□ 3.25
CHD1O14646 SHF-206ENST00000560471 2499 ntTSL 5 BASIC35.36■■■■□ 3.25
CHD1O14646 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CHD1O14646 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC35.36■■■■□ 3.25
CHD1O14646 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CHD1O14646 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC35.35■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms