Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 TPRG1LP1-201ENST00000598702 760 ntBASIC15.32■□□□□ 0.04
LYRM9A8MSI8 AL117328.2-201ENST00000624617 1940 ntBASIC15.32■□□□□ 0.04
LYRM9A8MSI8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYRM9A8MSI8 AC005224.4-201ENST00000583262 1652 ntBASIC15.32■□□□□ 0.04
LYRM9A8MSI8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYRM9A8MSI8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 AC097381.1-201ENST00000429019 1296 ntBASIC15.3■□□□□ 0.04
LYRM9A8MSI8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 MIR6821-201ENST00000617625 74 ntBASIC15.3■□□□□ 0.04
LYRM9A8MSI8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYRM9A8MSI8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYRM9A8MSI8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYRM9A8MSI8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.28■□□□□ 0.04
LYRM9A8MSI8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYRM9A8MSI8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYRM9A8MSI8 AP006587.3-201ENST00000525742 1516 ntBASIC15.28■□□□□ 0.04
LYRM9A8MSI8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LYRM9A8MSI8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYRM9A8MSI8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms