Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SSC5DA1L4H1 AP004607.7-201ENST00000527152 1677 ntBASIC25.37■■□□□ 1.65
SSC5DA1L4H1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 AC016405.3-201ENST00000607710 860 ntBASIC25.36■■□□□ 1.65
SSC5DA1L4H1 AC092118.2-201ENST00000613495 667 ntBASIC25.36■■□□□ 1.65
SSC5DA1L4H1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SSC5DA1L4H1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SSC5DA1L4H1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.34■■□□□ 1.65
SSC5DA1L4H1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SSC5DA1L4H1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SSC5DA1L4H1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SSC5DA1L4H1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.34■■□□□ 1.65
SSC5DA1L4H1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
SSC5DA1L4H1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SSC5DA1L4H1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 KRT18P29-201ENST00000397031 1267 ntBASIC25.33■■□□□ 1.65
SSC5DA1L4H1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 MYC-209ENST00000641252 345 ntBASIC25.33■■□□□ 1.65
SSC5DA1L4H1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SSC5DA1L4H1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SSC5DA1L4H1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SSC5DA1L4H1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SSC5DA1L4H1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.32■■□□□ 1.64
SSC5DA1L4H1 AP006587.3-201ENST00000525742 1516 ntBASIC25.32■■□□□ 1.64
SSC5DA1L4H1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SSC5DA1L4H1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SSC5DA1L4H1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SSC5DA1L4H1 OR10C1-204ENST00000622521 1039 ntBASIC25.31■■□□□ 1.64
SSC5DA1L4H1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 AC092068.2-201ENST00000590491 1708 ntBASIC25.3■■□□□ 1.64
SSC5DA1L4H1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 ANOS2P-203ENST00000472227 1816 ntBASIC25.3■■□□□ 1.64
SSC5DA1L4H1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SSC5DA1L4H1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
SSC5DA1L4H1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
SSC5DA1L4H1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SSC5DA1L4H1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SSC5DA1L4H1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.29■■□□□ 1.64
SSC5DA1L4H1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.29■■□□□ 1.64
SSC5DA1L4H1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 LINC00526-201ENST00000581067 1875 ntBASIC25.28■■□□□ 1.64
SSC5DA1L4H1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC25.28■■□□□ 1.64
SSC5DA1L4H1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms