Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 C17orf82-201ENST00000623772 1530 ntBASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRDV1A0A1B0GX56 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRDV1A0A1B0GX56 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRDV1A0A1B0GX56 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 DUX4L18-201ENST00000553347 1267 ntBASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRDV1A0A1B0GX56 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 MIR6722-201ENST00000617286 78 ntBASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 AC074183.2-201ENST00000623112 922 ntBASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRDV1A0A1B0GX56 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 AL049796.1-201ENST00000565336 1766 ntBASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 PVT1_1.1-201ENST00000615125 194 ntBASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms