Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ABHD17AP5-201ENST00000580133 923 ntBASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 LINC01006-201ENST00000333319 2292 ntBASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 GABARAPL3-202ENST00000624044 1851 ntBASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC103724.3-201ENST00000564481 992 ntBASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC068587.7-201ENST00000641602 218 ntBASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-1A0A0K0K1D8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC103834.1-201ENST00000520383 144 ntBASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-1A0A0K0K1D8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TSPY13P-201ENST00000338964 914 ntBASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV6-1A0A0K0K1D8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-1A0A0K0K1D8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-1A0A0K0K1D8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV6-1A0A0K0K1D8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-1A0A0K0K1D8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV6-1A0A0K0K1D8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-1A0A0K0K1D8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRBV6-1A0A0K0K1D8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms