Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC079140.4-201ENST00000507448 529 ntBASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC005224.4-201ENST00000583262 1652 ntBASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IGHV4-28A0A0C4DH34 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV4-28A0A0C4DH34 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 AL034346.1-201ENST00000568244 1277 ntBASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV4-28A0A0C4DH34 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC022517.1-201ENST00000592429 346 ntBASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC139530.1-201ENST00000575312 1977 ntBASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 ESRRAP2-201ENST00000418437 1549 ntBASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV4-28A0A0C4DH34 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 AC068473.5-201ENST00000616428 2072 ntBASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.46■□□□□ 0.07
IGHV4-28A0A0C4DH34 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms