Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 AC120498.9-201ENST00000339021 3867 ntBASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 CHML-204ENST00000638121 920 ntTSL 2 BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TRAV22A0A0B4J277 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 KRT18P10-201ENST00000388836 1287 ntBASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 PFN2-211ENST00000489155 636 ntTSL 4 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 CHST11-202ENST00000546689 756 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 MIR3665-201ENST00000578708 105 ntBASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TRAV22A0A0B4J277 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 AL022069.1-201ENST00000568025 1636 ntBASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV22A0A0B4J277 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms