Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OR52V1P-201ENST00000515557 898 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 MIR5001-201ENST00000580185 100 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC12.42□□□□□ -0.42
SLC1A1P43005 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 AC012486.1-201ENST00000625143 216 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 CYP4A22-207ENST00000620131 1760 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 ZNF540-210ENST00000592533 3147 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 SLC14A1-204ENST00000436407 2264 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 BOC-215ENST00000495514 4646 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 AP3B2-202ENST00000535348 3254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 FAM133B-203ENST00000438306 2434 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 PDZRN3-203ENST00000462146 2927 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 AC098679.1-201ENST00000503611 2917 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 ERCC6-203ENST00000447839 3411 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 VPS45-212ENST00000611412 2064 ntTSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 TTK-208ENST00000509894 3725 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 AC007608.4-201ENST00000623140 3365 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 AC105053.1-201ENST00000366278 1711 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 SCGB2B2-203ENST00000601241 2505 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 AL139274.2-201ENST00000606274 4127 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 MEP1A-202ENST00000611727 2971 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 DRD1-201ENST00000393752 4054 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 SPDYE1-201ENST00000258704 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 FAM198B-202ENST00000393807 4544 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 BCAT1-205ENST00000539282 1811 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 LINC00052-201ENST00000560153 1966 ntTSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC12.41□□□□□ -0.42
SLC1A1P43005 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 ACTN4P1-201ENST00000514175 1451 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 BTNL8-210ENST00000533815 1600 ntTSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 ALS2CL-203ENST00000415953 3471 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 DHDDS-201ENST00000236342 1403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SLC1A1P43005 FAM166A-201ENST00000344774 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SLC1A1P43005 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SLC1A1P43005 AL021068.1-201ENST00000392097 911 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 TCHP-202ENST00000405876 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
SLC1A1P43005 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC12.41□□□□□ -0.42
SLC1A1P43005 AP000925.1-201ENST00000425960 1449 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 AC006987.2-201ENST00000434709 527 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 AL157366.1-201ENST00000447435 418 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC12.41□□□□□ -0.42
SLC1A1P43005 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 GM2AP1-201ENST00000491450 521 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.41□□□□□ -0.42
SLC1A1P43005 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 AAMDC-211ENST00000533193 606 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 OLR1-211ENST00000545927 1008 ntTSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 ACTG1P16-201ENST00000564713 1082 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC12.41□□□□□ -0.42
SLC1A1P43005 RN7SL602P-201ENST00000578326 324 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC12.41□□□□□ -0.42
SLC1A1P43005 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 OR10G1P-201ENST00000612164 944 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 AC100835.2-201ENST00000617850 479 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 pRNA.4-201ENST00000620973 89 ntBASIC12.41□□□□□ -0.42
SLC1A1P43005 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 ITGA7-213ENST00000555728 3930 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 SMARCAD1-204ENST00000457823 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 C17orf47-201ENST00000321691 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 SPIN3-223ENST00000639525 3958 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SLC1A1P43005 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC12.41□□□□□ -0.42
SLC1A1P43005 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC12.41□□□□□ -0.42
SLC1A1P43005 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC12.4□□□□□ -0.42
SLC1A1P43005 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 AOC1-207ENST00000493429 3135 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 RBM28-202ENST00000415472 2251 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms