Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL050303.4-201ENST00000624520 1839 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC12.48□□□□□ -0.41
MTHFRP42898 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
MTHFRP42898 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 NMRAL2P-201ENST00000306399 891 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 SPATA32-201ENST00000331780 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 LINC01874-201ENST00000427398 510 ntTSL 2 BASIC12.48□□□□□ -0.41
MTHFRP42898 AL772155.2-201ENST00000443910 472 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 Z70280.1-201ENST00000490943 295 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC12.48□□□□□ -0.41
MTHFRP42898 AL645924.1-201ENST00000502641 220 ntTSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 ASS1P10-201ENST00000507235 1244 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 MRPL27-206ENST00000511860 869 ntTSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 AC019254.2-201ENST00000560938 556 ntTSL 2 BASIC12.48□□□□□ -0.41
MTHFRP42898 AC009088.4-201ENST00000575892 280 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 MIR4721-201ENST00000577590 89 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 AP003973.2-201ENST00000604700 499 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 FAAHP1-206ENST00000635298 708 ntTSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 ABHD11-AS1-202ENST00000641969 358 ntBASIC12.48□□□□□ -0.41
MTHFRP42898 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC12.48□□□□□ -0.41
MTHFRP42898 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
MTHFRP42898 YAF2-203ENST00000534854 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC12.48□□□□□ -0.41
MTHFRP42898 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 LINC01898-201ENST00000564156 1903 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 ZNF619-209ENST00000521353 1869 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 RHBDL2-202ENST00000372990 1837 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MTHFRP42898 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 SPATA22-204ENST00000541913 1683 ntTSL 2 BASIC12.48□□□□□ -0.41
MTHFRP42898 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 FAN1-203ENST00000561607 2690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 BTNL2-203ENST00000454136 1460 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 AC010536.1-201ENST00000538868 2611 ntBASIC12.47□□□□□ -0.41
MTHFRP42898 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 GSTA2-201ENST00000493422 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 VTI1BP2-201ENST00000394154 696 ntBASIC12.47□□□□□ -0.41
MTHFRP42898 AL031727.2-201ENST00000416470 207 ntTSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 RPL12P2-201ENST00000424565 493 ntBASIC12.47□□□□□ -0.41
MTHFRP42898 AP001630.1-201ENST00000428410 437 ntTSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 CLDN24-201ENST00000514470 663 ntBASIC12.47□□□□□ -0.41
MTHFRP42898 AP001189.3-201ENST00000531511 651 ntTSL 3 BASIC12.47□□□□□ -0.41
MTHFRP42898 SPON1-AS1-201ENST00000534587 240 ntTSL 3 BASIC12.47□□□□□ -0.41
MTHFRP42898 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 CLDN24-202ENST00000541814 663 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
MTHFRP42898 AP001180.5-201ENST00000581948 730 ntBASIC12.47□□□□□ -0.41
MTHFRP42898 MIR3194-201ENST00000582236 73 ntBASIC12.47□□□□□ -0.41
MTHFRP42898 AC079779.3-227ENST00000591927 860 ntTSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC12.47□□□□□ -0.41
MTHFRP42898 AC010328.3-201ENST00000600068 553 ntTSL 4 BASIC12.47□□□□□ -0.41
MTHFRP42898 LINC00969-247ENST00000608737 956 ntTSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 GGNBP1-203ENST00000612409 592 ntTSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 MIR6749-201ENST00000617008 69 ntBASIC12.47□□□□□ -0.41
MTHFRP42898 AC005609.5-202ENST00000624176 513 ntTSL 4 BASIC12.47□□□□□ -0.41
MTHFRP42898 NFE4-202ENST00000638942 962 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.47□□□□□ -0.41
MTHFRP42898 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 CLEC4M-208ENST00000596363 1669 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 AC093690.1-201ENST00000418963 2110 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 STRADA-205ENST00000447001 2014 ntTSL 2 BASIC12.47□□□□□ -0.41
MTHFRP42898 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
MTHFRP42898 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MTHFRP42898 CSPG4P13-202ENST00000567704 4801 ntBASIC12.46□□□□□ -0.41
MTHFRP42898 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MTHFRP42898 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MTHFRP42898 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MTHFRP42898 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MTHFRP42898 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms