Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 APOC1P1-202ENST00000571466 253 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 DERL2-206ENST00000572834 589 ntTSL 3 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 MEG8_1.1-201ENST00000617245 97 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AL391669.1-201ENST00000619829 285 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 ARL14EPL-203ENST00000634632 642 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 LINC02372-201ENST00000507482 1486 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CSPG4P12-201ENST00000558282 4853 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 C2orf15-201ENST00000302513 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CPLX4-201ENST00000299721 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 DUXAP8-202ENST00000413768 2102 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC097372.1-201ENST00000636502 2127 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 OR10G3-202ENST00000641040 2533 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 DBIL5P-203ENST00000536214 2677 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 SNX16-203ENST00000396330 3452 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 TACC2-201ENST00000260733 3644 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 RNF207-201ENST00000377939 3924 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 FGF5-203ENST00000456523 5234 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 DCK-204ENST00000504952 2614 ntTSL 3 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AC100868.1-201ENST00000262283 2413 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 GRHL3-202ENST00000350501 2119 ntTSL 2 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 OR13C9-201ENST00000259362 957 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AL451165.1-201ENST00000334441 328 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 CD72-203ENST00000378431 849 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 SLC25A6P3-201ENST00000424829 879 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 GAPDHP65-201ENST00000425487 1006 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 PTPN2P2-201ENST00000433704 1024 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 Z93242.2-201ENST00000445666 394 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AL513366.1-201ENST00000456427 1248 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 RN7SL255P-201ENST00000470639 296 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 ALG1L14P-201ENST00000514230 434 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 OR10V2P-201ENST00000525296 764 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 PHLDB1-217ENST00000530708 874 ntTSL 5 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 RN7SL322P-201ENST00000583519 299 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AC080038.2-201ENST00000617734 423 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AC026401.3-201ENST00000624682 882 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 FP236383.2-201ENST00000625598 923 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 FP236383.3-201ENST00000627981 923 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 PASK-216ENST00000629419 216 ntTSL 5 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 FP671120.3-201ENST00000631211 923 ntBASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
NPIPA3F8WFD2 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 RCAN2-202ENST00000330430 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 GOLGA2P1-201ENST00000512938 2906 ntBASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 ST5-207ENST00000526099 2404 ntTSL 2 BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 NMUR2-201ENST00000255262 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 AC073335.2-201ENST00000610177 3441 ntBASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
NPIPA3F8WFD2 AL390838.1-201ENST00000423515 2007 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 265.7 ms