Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 SLC47A1P1-202ENST00000449666 945 ntBASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRB4X5D2U9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRB4X5D2U9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 BX842568.3-201ENST00000418104 571 ntBASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 PBX2P1-201ENST00000493219 1291 ntBASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 AP005435.1-201ENST00000529293 1178 ntBASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRB4X5D2U9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 AC080038.3-201ENST00000623346 1952 ntBASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 AC010141.3-201ENST00000456659 717 ntBASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 AC106739.1-201ENST00000617035 715 ntBASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRB4X5D2U9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRB4X5D2U9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRB4X5D2U9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRB4X5D2U9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DRB4X5D2U9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRB4X5D2U9 AC139530.1-201ENST00000575312 1977 ntBASIC16.11■□□□□ 0.17
HLA-DRB4X5D2U9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DRB4X5D2U9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms