Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.81■□□□□ 0.28
TSSC4Q9Y5U2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 AC004854.2-201ENST00000608450 1441 ntBASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.8■□□□□ 0.28
TSSC4Q9Y5U2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 AC006015.1-201ENST00000429970 570 ntBASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSSC4Q9Y5U2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 AC068473.5-201ENST00000616428 2072 ntBASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 LINC01960-201ENST00000563759 1884 ntBASIC16.78■□□□□ 0.28
TSSC4Q9Y5U2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 AC080038.1-201ENST00000611274 1154 ntBASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 AC005224.4-201ENST00000583262 1652 ntBASIC16.77■□□□□ 0.28
TSSC4Q9Y5U2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TSSC4Q9Y5U2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TSSC4Q9Y5U2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TSSC4Q9Y5U2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TSSC4Q9Y5U2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 KRT18P11-201ENST00000435214 1283 ntBASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 KRT18P61-201ENST00000585825 1298 ntBASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TSSC4Q9Y5U2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TSSC4Q9Y5U2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms