Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CAPN11Q9UMQ6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CAPN11Q9UMQ6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CAPN11Q9UMQ6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN11Q9UMQ6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 AC099791.2-201ENST00000605725 427 ntBASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 AC068587.7-201ENST00000641602 218 ntBASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.29■■□□□ 1.32
CAPN11Q9UMQ6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN11Q9UMQ6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.27■■□□□ 1.32
CAPN11Q9UMQ6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CAPN11Q9UMQ6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 MIR3181-201ENST00000578512 73 ntBASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 AC104564.3-201ENST00000582367 638 ntBASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.26■■□□□ 1.31
CAPN11Q9UMQ6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 OR2I1P-207ENST00000453522 948 ntBASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CAPN11Q9UMQ6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 KRT16P3-201ENST00000439127 1283 ntBASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CAPN11Q9UMQ6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPN11Q9UMQ6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPN11Q9UMQ6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.23■■□□□ 1.31
CAPN11Q9UMQ6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.23■■□□□ 1.31
CAPN11Q9UMQ6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPN11Q9UMQ6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CAPN11Q9UMQ6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CAPN11Q9UMQ6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms