Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DKK4Q9UBT3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DKK4Q9UBT3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 MIR718-201ENST00000390190 70 ntBASIC20.31■□□□□ 0.84
DKK4Q9UBT3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DKK4Q9UBT3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 UNC93B5-201ENST00000530315 699 ntBASIC20.3■□□□□ 0.84
DKK4Q9UBT3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 AC016405.3-201ENST00000607710 860 ntBASIC20.3■□□□□ 0.84
DKK4Q9UBT3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DKK4Q9UBT3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 AC073648.6-201ENST00000641589 218 ntBASIC20.29■□□□□ 0.84
DKK4Q9UBT3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DKK4Q9UBT3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.28■□□□□ 0.84
DKK4Q9UBT3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DKK4Q9UBT3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DKK4Q9UBT3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 AP003097.1-201ENST00000530657 1135 ntBASIC20.26■□□□□ 0.83
DKK4Q9UBT3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 MIR4497-201ENST00000583208 89 ntBASIC20.26■□□□□ 0.83
DKK4Q9UBT3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DKK4Q9UBT3 AP003733.4-201ENST00000623785 1697 ntBASIC20.26■□□□□ 0.83
DKK4Q9UBT3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DKK4Q9UBT3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DKK4Q9UBT3 ECEL1P3-201ENST00000427961 737 ntBASIC20.25■□□□□ 0.83
DKK4Q9UBT3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.25■□□□□ 0.83
DKK4Q9UBT3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.25■□□□□ 0.83
DKK4Q9UBT3 AL162412.1-201ENST00000567129 965 ntBASIC20.25■□□□□ 0.83
DKK4Q9UBT3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.25■□□□□ 0.83
DKK4Q9UBT3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.25■□□□□ 0.83
DKK4Q9UBT3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms