Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COMMD9Q9P000 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 LINC01521-201ENST00000504184 1943 ntBASIC18.26■□□□□ 0.51
COMMD9Q9P000 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 MIR4281-201ENST00000580852 62 ntBASIC18.26■□□□□ 0.51
COMMD9Q9P000 BHLHE23-202ENST00000612929 1109 ntBASIC18.26■□□□□ 0.51
COMMD9Q9P000 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COMMD9Q9P000 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD9Q9P000 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.25■□□□□ 0.51
COMMD9Q9P000 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COMMD9Q9P000 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
COMMD9Q9P000 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.25■□□□□ 0.51
COMMD9Q9P000 AF131216.4-201ENST00000638924 1588 ntBASIC18.25■□□□□ 0.51
COMMD9Q9P000 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COMMD9Q9P000 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD9Q9P000 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
COMMD9Q9P000 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.24■□□□□ 0.51
COMMD9Q9P000 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COMMD9Q9P000 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
COMMD9Q9P000 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.24■□□□□ 0.51
COMMD9Q9P000 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.24■□□□□ 0.51
COMMD9Q9P000 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD9Q9P000 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 AC004448.1-201ENST00000458332 883 ntBASIC18.23■□□□□ 0.51
COMMD9Q9P000 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD9Q9P000 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD9Q9P000 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD9Q9P000 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD9Q9P000 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD9Q9P000 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD9Q9P000 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD9Q9P000 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD9Q9P000 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
COMMD9Q9P000 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD9Q9P000 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
COMMD9Q9P000 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD9Q9P000 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD9Q9P000 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD9Q9P000 ATP5G2P3-201ENST00000429083 425 ntBASIC18.21■□□□□ 0.51
COMMD9Q9P000 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.21■□□□□ 0.51
COMMD9Q9P000 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.21■□□□□ 0.51
COMMD9Q9P000 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD9Q9P000 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD9Q9P000 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COMMD9Q9P000 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.21■□□□□ 0.51
COMMD9Q9P000 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms