Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AL358852.1-201ENST00000623174 1268 ntBASIC26.33■■□□□ 1.81
ECHDC1Q9NTX5 AC079834.2-201ENST00000609776 1949 ntBASIC26.33■■□□□ 1.81
ECHDC1Q9NTX5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ECHDC1Q9NTX5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
ECHDC1Q9NTX5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
ECHDC1Q9NTX5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
ECHDC1Q9NTX5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 C11orf96-202ENST00000528572 1834 ntBASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 AL034346.1-201ENST00000568244 1277 ntBASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.31■■□□□ 1.8
ECHDC1Q9NTX5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ECHDC1Q9NTX5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 BX005040.4-201ENST00000637145 1518 ntBASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 MIR6084-201ENST00000622012 110 ntBASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 FAM99A-202ENST00000538190 1989 ntBASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ECHDC1Q9NTX5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ECHDC1Q9NTX5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 AC019069.1-201ENST00000610008 1333 ntBASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
ECHDC1Q9NTX5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ECHDC1Q9NTX5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ECHDC1Q9NTX5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms